Gene Information

Name : dnaB (ebA4079)
Accession : YP_159344.1
Strain : Aromatoleum aromaticum EbN1
Genome accession: NC_006513
Putative virulence/resistance : Unknown
Product : replicative DNA helicase protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 2409964 - 2411364 bp
Length : 1401 bp
Strand : +
Note : -

DNA sequence :
ATGGCCACTTCAAAGCGACGCTTTTCCGATAGCTCGAGTGATCCGCAGATTTCCGCAATCAAGCTCCCGCCGCATTCGCT
CGAGGCCGAACAGTCGCTGATCGGCGGCATCCTGCTCGATAACGCCGCATGGGAGCGAATTGCGGATCTCGTCAATGAGG
TGGATTTCTATCGGGACGATCATCGCCGCATCTACCGCCACATCTCCCGATTGATCGATCTGGGAAAACCCGCTGATGTC
GTGACGGTCTTCGAGTCGCTCGAAAAGAACGGCGAGACCGAGCAGGCAGGTGGGCTCGCCTACCTCGCAGAAGTCGCGAA
CAACACCCCGTCTGCGGCAAATATCCGCCGCTACGCGGAAATCGTTCGCGAGCGTGCGATCCTGCGCAAGATGGTCGCCG
TGGGCGATGAGATTGCCGCCAGCGCATTGAGTGCCTCGGGCAAGGACGCGAAGACGCTGCTCGATGAGGCCGAAGCCAAG
GTTTTCGAGATCGCCGAGGCGGGCGCGCGACACGCGAGCGGCTTCGTGTCGATCCAGCCGATCCTGAAGCAGGTCGTTGA
CCGCGTCCAGGAACTGTACGACCGCGACAATCCGCTCGAGGTGACCGGAGTGCCGACCGGTCTCATCGACCTCGACGAGA
AGACTTCCGGCCTACAGCCGTCCGACATGATCATCGTTGCGGGCCGACCTGCGATGGGCAAAACGACTTTCGCCCTGAAC
GTCGCCGAGCATGTCGCCGTCGACTGTCGTCTGCCAGTGGCGATTTTCTCGATGGAAATGCCCGGTACGCAGCTCGCCAC
GCGTTTCATCTCGTCGGTGGGGCGAATCGACCAGCAGAAGATCCGTACCGGCCGTCTCGGCGACGAGGATTGGCAGCGAC
TCACGGCGGCGATGGGCAAGCTCTACGACGCACCGCTGTTCATCGACGAGACGCCGGGCCTCAACCCGATCGACCTTCGC
GCTCGGGCGCGCCGCCTGTCGCGCCAGTGCGGCAAGCTCGGTCTGATCGTCATCGACTACATTCAGCTGATGACCGGCAC
GAAGGACACGGACAACCGCGCCTCCGAGCTCTCCGAAATTTCGCGGTCGATCAAGTCGCTGGCAAAGGAGTTGCACGTAC
CGATCATCGCGCTGTCTCAGCTCAACCGCAGCCTGGAGCAGCGGCCGAACAAGCGCCCGGTGATGTCCGACCTGCGCGAA
TCGGGCGCTATCGAGCAAGATGCCGACATCATCATGTTCATCTACCGCGACGAGGTCTACAACCCGGACTCCCCGGACAA
GGGCTCGGCCGAGCTGATCATCGGCAAGCATCGCAACGGACCGACCGGGACGGTGCGCATGACGTTCATCGGCGAATGCA
CGCGCTTCGAGAATTACGCGGGAGGCGTTGCTGGGTATTGA

Protein sequence :
MATSKRRFSDSSSDPQISAIKLPPHSLEAEQSLIGGILLDNAAWERIADLVNEVDFYRDDHRRIYRHISRLIDLGKPADV
VTVFESLEKNGETEQAGGLAYLAEVANNTPSAANIRRYAEIVRERAILRKMVAVGDEIAASALSASGKDAKTLLDEAEAK
VFEIAEAGARHASGFVSIQPILKQVVDRVQELYDRDNPLEVTGVPTGLIDLDEKTSGLQPSDMIIVAGRPAMGKTTFALN
VAEHVAVDCRLPVAIFSMEMPGTQLATRFISSVGRIDQQKIRTGRLGDEDWQRLTAAMGKLYDAPLFIDETPGLNPIDLR
ARARRLSRQCGKLGLIVIDYIQLMTGTKDTDNRASELSEISRSIKSLAKELHVPIIALSQLNRSLEQRPNKRPVMSDLRE
SGAIEQDADIIMFIYRDEVYNPDSPDKGSAELIIGKHRNGPTGTVRMTFIGECTRFENYAGGVAGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 8e-101 51
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 4e-89 48
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-88 47
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 9e-84 46
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-84 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-84 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-84 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-76 44
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 4e-82 44