Gene Information

Name : pilR (ebA3894)
Accession : YP_159236.1
Strain : Aromatoleum aromaticum EbN1
Genome accession: NC_006513
Putative virulence/resistance : Virulence
Product : response regulator PilR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 2299812 - 2301182 bp
Length : 1371 bp
Strand : +
Note : -

DNA sequence : 
ATGAACCACCCCGAACGACGCCAACGCCCCCGCATCGACGTCCTCGTCGTCGACGACGAGGAAGACATCCGCGAAGTGCT
CGAGCTGTCGCTGATGCGCATGGGCCTCGGATGCGACACTGTCGGCACGATCGCCGATGCGTGCCGGCTGCTCGGCGACC
GGGCTTATCGGCTGTGCCTCACGGACATGCGCCTGCCCGATGGCGACGGCATCGAGCTCGTTGCCCACATCCAGACCCAG
CAGCCAGGCCTGCCGGTCGCGGTCGTCACCGCCTACGGCAGCATCGAAACCGCGATCCGCGCGCTCAAGGCCGGCGCTTT
CGACTTCGTCACGAAGCCTGTTGAGCTGAAGGCGCTGCGCGAACTCGTCAGTCACGCTCTCCGGCTTGCGCAGCCGGCCA
GGGTCGCCCCTGCCGTCGCGAGCGGCCGCAGCCTGATCGGGTGCTCCGCGGCGCTCGCGCAGTTGCGCGTGCAGGTCGAA
AAGCTCGCGCGCAACCAGGCGCCGGTGTTTATCCACGGGGAATCCGGCACTGGCAAGGAAGTCACCGCGCGCCTGATCCA
CGAGCTCGGCCCGCGCGCCGCCGGCCCGTTCGTGCCGGTCAACTGCGGCGCGATCTCGCCGGAGCTGATGGAAAGCGAGT
TCTTCGGCCACCGCAAAGGCAGCTTCACCGGCGCGGTGTCGGACAAGGATGGCCTGTTCCAGGCGGCGCGCGGCGGCACG
CTGTTTCTCGACGAAGTAGCCGACCTGCCGCTGGCGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAACGCGCAGTGCG
CCCGGTCGGCGCGCACGCCGAGGAGTCGGTCGATGTGCGCATCCTGTCGGCGTCGCACCGCGACCTCGCGCAGCTCGTCG
CTGCAGGCAAGTTTCGCCAGGACCTGTACTTCCGCATCAACGTCATCACGCTGCGTGTGCCGCCGCTGCGCGAACGCCCC
GAAGACATCCCGGAGCTTGCCGCGCACATCCTCGCCCGGCTCGCCGAGCGCGAAGGCGGTGCGCCTCGTCGCCTGAGCGC
AGGCGCCGCAGCCGAACTCCAGCAGCACGCTTTTCCGGGCAACGTGCGCGAGCTCGAAAATCTTCTCGAACGCGCGTGCG
CGCTGTGCGACGGCGACGAGATCGGCGTCGACGACGTCAGGCTGTACCCGACGACAGGCATCGGCGAGCCGCTGCGCTTC
GACTTCGGCGATCACTCCGACGACGAGCGCGACGGCGACGGCGACGACGAGCGCCTGCGCGTGCTGCGCATGCTCGACGA
CACCCGTTGGAACCGTTCTGAAGCCGCGCGCCGGCTCGGCATGACGCTGCGCCAGCTGCGCTACCGGCTGCAGAAGTGGG
GGATGGAGTAA

Protein sequence : 
MNHPERRQRPRIDVLVVDDEEDIREVLELSLMRMGLGCDTVGTIADACRLLGDRAYRLCLTDMRLPDGDGIELVAHIQTQ
QPGLPVAVVTAYGSIETAIRALKAGAFDFVTKPVELKALRELVSHALRLAQPARVAPAVASGRSLIGCSAALAQLRVQVE
KLARNQAPVFIHGESGTGKEVTARLIHELGPRAAGPFVPVNCGAISPELMESEFFGHRKGSFTGAVSDKDGLFQAARGGT
LFLDEVADLPLAMQVKLLRAIQERAVRPVGAHAEESVDVRILSASHRDLAQLVAAGKFRQDLYFRINVITLRVPPLRERP
EDIPELAAHILARLAEREGGAPRRLSAGAAAELQQHAFPGNVRELENLLERACALCDGDEIGVDDVRLYPTTGIGEPLRF
DFGDHSDDERDGDGDDERLRVLRMLDDTRWNRSEAARRLGMTLRQLRYRLQKWGME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-95 48
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-95 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_159236.1 response regulator PilR BAC0467 Protein 2e-70 43
pilR YP_159236.1 response regulator PilR BAC0089 Protein 4e-64 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_159236.1 response regulator PilR VFG1214 Protein 5e-118 59
pilR YP_159236.1 response regulator PilR VFG1249 Protein 6e-61 44
pilR YP_159236.1 response regulator PilR VFG0116 Protein 2e-59 42