Gene Information

Name : istA (ebA385)
Accession : YP_157224.1
Strain : Aromatoleum aromaticum EbN1
Genome accession: NC_006513
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 232949 - 234526 bp
Length : 1578 bp
Strand : +
Note : -

DNA sequence : 
ATGGATTTCGCCGCCGAACTGACCGCTTTCGACCTGCCGCCCGCGCTCGCGCAGCAGGTTCAGCGGTGGGTCGCGCAGGC
GGCCGACGTGGCCCGCCTGGAAGCCGAGCTCAAGCTGAGCAAGCTCAAGATCGAGGCCCTGGTCCACGAGATCGCCACCC
TCAAGCGCCTGCGCTTTGGCGCGCGCAGCGAGACGCTGCCGGCGGGCATGAAGGACTTGTTCGACGAGACGCTCGCGGCC
GATCTGGCCGCGTGCGAAGCCCGGCTCGAGGCGCTGCGCGACGCCGCGGCATCCGAAGCCGAAGCGTCTCCGAAGGCCCC
GCCCGAGCGCCCCCGCGCCGGCCGCCCGCCGTTGCCGGCACACCTCGAGCGCATCGAACACCGCCACGAGCCCGAATCCT
GCAGCTGCGCCGCGTGCGGGCAGGATCTGGTCAAGATCGGCGAGGACGTCTCCGAGCAGCTCGACATCATCCCGGCCAAG
TTCTTCGTGCATCGCCACATCCGTCCGCAGTACGCCTGCCGGCACTGCGAGACGGTCTCGACCGCCCCCGTGCCGGCGGC
GGTCATCGACGGCGGCCTGGCCGCGCCGGGGCTGCTGGCGTGGGTGACGGTGAGCAAGTTCGTCGATCATCTGCCGCTGT
ACCGGCTCGAACAGATTGCCCGGCGCAGCGAGGTGGCGCTACCGCGCTCGACACAGTCCGAGTGGATCGGGCGTATCGGG
GTGGCGCTGTCGCCCCTCTACGCTCGACTGGTCGAGCATCTGTTGGCGGGTACGGTGCTGCATGCGGACGAAACCCCCGT
CGAGCAACTCGATCCGGGGCGCGGCAAGACGAAGCGGGCGTATCTGTGGGCCTACCGCAGCAATACGCTCGGCGCCGACC
CGCCCATCATCCTCTTCGATTACCAGCCCGGGCGCGGCGGGCAATATCCCCAGGCCTTCCTGAAAGGCTGGAAGGGCATG
CTCATGGTCGATGACTACGCGGGGTACAAGGCGCTGCTGGGGGGCGACATCGGCGAGTTGGCCTGCATGGCCCATGCAAG
ACGCAAGTACTTCGAACTGCATCAGGCCAACAAGAGCCCGGTGGCGGCCGAGGCGTTGCGGCGCATCGGCGAATTGTATG
CGCTCGAAGAGCAGGCGCGCGACGTCTCGATCGAGGCGCGCGCCGAACTGCGCGCGCAGTACGCCCGCCCGCGTCTGGAG
GCGATGTACCTGTGGCTCGTGCAGACCCGCAAGACCGTGGCCGATGGCGCGGCGCTGGCGCGCGCCATCGACTACAGCTT
GAAGCGCTGGCCGGCGCTCGCGCGTTACGCGAGCCGTGGCGACTGGCCGATCGACAATAATCCAATCGAGAACGCCATCC
GCCCGATCGCTCTGGGCAAGAAAAATTGGATGTTTGCGGGTTCCGAAGCCGCCGGCAAGCGGGCCGCGGTGATTCAGTCG
CTGCTCGCCACCGCACGCGCCAATGGCTTCGAGCCCCTGGCGTGGCTCTCCGACACCCTCGAGAAGCTGCCGGCCTGGCC
CAACAGCCGCATCGACGAATTGCTGCCGATCAGAAAGAAAGAGTCTGCGCAAGCGTAA

Protein sequence : 
MDFAAELTAFDLPPALAQQVQRWVAQAADVARLEAELKLSKLKIEALVHEIATLKRLRFGARSETLPAGMKDLFDETLAA
DLAACEARLEALRDAAASEAEASPKAPPERPRAGRPPLPAHLERIEHRHEPESCSCAACGQDLVKIGEDVSEQLDIIPAK
FFVHRHIRPQYACRHCETVSTAPVPAAVIDGGLAAPGLLAWVTVSKFVDHLPLYRLEQIARRSEVALPRSTQSEWIGRIG
VALSPLYARLVEHLLAGTVLHADETPVEQLDPGRGKTKRAYLWAYRSNTLGADPPIILFDYQPGRGGQYPQAFLKGWKGM
LMVDDYAGYKALLGGDIGELACMAHARRKYFELHQANKSPVAAEALRRIGELYALEEQARDVSIEARAELRAQYARPRLE
AMYLWLVQTRKTVADGAALARAIDYSLKRWPALARYASRGDWPIDNNPIENAIRPIALGKKNWMFAGSEAAGKRAAVIQS
LLATARANGFEPLAWLSDTLEKLPAWPNSRIDELLPIRKKESAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 8e-94 52
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 7e-89 50
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-75 46
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 1e-71 43
tnp AEA34686.1 transposase Not tested Not named Protein 6e-69 42
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 6e-69 42
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 8e-69 42
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-69 42
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 5e-69 42
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-69 42
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 5e-69 42
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-69 42
unnamed AAL57570.1 unknown Not tested LEE Protein 3e-69 42
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 3e-68 41
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-68 41
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istA YP_157224.1 transposase VFG0793 Protein 2e-69 42