Gene Information

Name : colR (ebA3319)
Accession : YP_158896.1
Strain : Aromatoleum aromaticum EbN1
Genome accession: NC_006513
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator ColR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1975791 - 1976474 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATTCTCGTTATCGAAGACAATCGTGACATTCTCGTCAACGTGCTCGACTATCTGCAGCTCAAGGGCTACATCGT
CGACTGTGCCCAGGACGGGTTGAGCGGTTTGCACCTGGCGGTGACCGAGCAGTACGACTTGATCGTCCTGGACATCATGC
TGCCGGGTGTCGACGGCTATCAGGTGTGCAAGCGTCTTCGCGAGGATGCGGGGCGTGACACGCCCATCATCATGCTCACG
GCGAGGGATGCCCTGGATGATCGTTTGCGGGGCCTGAATGCCGGGGCTGACGACTACTTGATCAAACCCTTCGCTCTGTC
GGAACTGGTTGCACGCATCGAGGCAATCCTTCGGCGAAGCCAGGGGAGCCGCACGCGACTTCTACAGGTCGGTGATCTTT
CCCTTGACGTGGATACGCTGCAGGCCACCCGTGGCGGGCGGGCGCTCAAGCTCAACCCGATCGGCTTGAAGCTGCTCGAA
ATCCTCATGCGAAGAAGCCCGGCTGTGGTTCGTCGAGATACGCTCGAGGAAGCCCTATGGGGGGAGAACCTGCCGGAAAG
CGACAGTCTGCGCAGCCATATCCATCAGCTGCGCCAAGTCCTCGACAAACCTTTCGCAAAGCCGCTGCTGCATACCATTC
ACAGCGTTGGTTATCGCCTGTCGGAGAGATCCGATGCTGTCTAA

Protein sequence : 
MRILVIEDNRDILVNVLDYLQLKGYIVDCAQDGLSGLHLAVTEQYDLIVLDIMLPGVDGYQVCKRLREDAGRDTPIIMLT
ARDALDDRLRGLNAGADDYLIKPFALSELVARIEAILRRSQGSRTRLLQVGDLSLDVDTLQATRGGRALKLNPIGLKLLE
ILMRRSPAVVRRDTLEEALWGENLPESDSLRSHIHQLRQVLDKPFAKPLLHTIHSVGYRLSERSDAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-40 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-39 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_158896.1 DNA-binding response regulator ColR BAC0197 Protein 1e-40 42
colR YP_158896.1 DNA-binding response regulator ColR BAC0125 Protein 9e-38 41
colR YP_158896.1 DNA-binding response regulator ColR BAC0083 Protein 3e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_158896.1 DNA-binding response regulator ColR VFG0596 Protein 1e-40 43