Gene Information

Name : tnpF6 (ebB55)
Accession : YP_158100.1
Strain : Aromatoleum aromaticum EbN1
Genome accession: NC_006513
Putative virulence/resistance : Unknown
Product : transposase, fragment
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1145638 - 1145976 bp
Length : 339 bp
Strand : -
Note : -

DNA sequence :
ATGATTCCGCCGGAGCAGATCTGGCTCGCGGTCGAGCCGATCGACATGCGTCTGGGCATCGACGGTCTGTCTGCACGACT
GCAGAACAGCCTGGGCCGCGCGCCGTGCGATGGCAGTGCGTACGCCTTCATCAACCGGGCCCGCACGCGCCTGAAGGTGC
TGCTGTGGGATGGCACCGGGGTGTGGCTGAGTCAGCGGCGTCTGCATCGGGGCAGCTTCAGTTGGCCCGCTGCCGATACG
GCGGTGTTCGCGCTGTCGGCCGAGCAGTGGCAGTGGCTCGTGGCGGGGGTGCAATGGCAGCGCCTGAGCGCCGCCGCCCC
GGCGCACTGGCGGGTGTGA

Protein sequence :
MIPPEQIWLAVEPIDMRLGIDGLSARLQNSLGRAPCDGSAYAFINRARTRLKVLLWDGTGVWLSQRRLHRGSFSWPAADT
AVFALSAEQWQWLVAGVQWQRLSAAAPAHWRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1602 NP_287106.1 hypothetical protein Not tested TAI Protein 8e-22 49
Z1163 NP_286698.1 hypothetical protein Not tested TAI Protein 8e-22 49
unnamed ABR13518.1 transposase Not tested PAGI-7 Protein 2e-17 45
EXB18 ABD94704.1 ISPpu14 transposase Orf2 Not tested ExoU island B Protein 5e-17 45
RL060 AAP84185.1 transposase Not tested PAPI-1 Protein 1e-16 44
tnpB AEZ06052.1 transposition helper protein Not tested Tn6167 Protein 3e-15 41
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 1e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpF6 YP_158100.1 transposase, fragment VFG1517 Protein 5e-10 41