|
Name : thiC (IL0765) Accession : YP_155155.1 Strain : Idiomarina loihiensis L2TR Genome accession: NC_006512 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 821721 - 823427 bp Length : 1707 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCAACTGCACCATCGAATAACCGTTTAAACCGCCAACAGGCTGAATCCTTCTTATCATCACTATCCGGGCATTATTA CCCTAATTCCAGCCGTGAATTTATTTCAGGCAGCAACAAAGACATCCAGGTCCCCTTTCGTCGCATTCACCTTAGCGAAA CCCTGCACCAGCCCACACCGGGCGTGAAGTTACCACCGAACGAACCGGTAGATGTGTATGATACATCCAGTGTCTACGGT GACCCGGATGCCACAATTGACGTAAAAGCGGGTCTGAAAAAGGTTCGTGAAAACTGGATTCAGGAGCGCCATAGCGAGAA CCAGCAATATAATCACGGCATTACGCAGTTAGCTTACGCAAGGCGCGGCGTGATCACCCCTGAGATGGAGTTCATTGCAC TGCGCGAGAATATGGGTCGGGGGCACCTTAAGAACCCCATAACACCGGAATTTGTACGCGACGAAGTCGCCAGTGGACGC GCGATTATTCCCGTTAATACCCACCACCCCGAATCAGAACCAATGATTATTGGCCGCAACTTTTTGGTTAAAGTGAATGC CAACATTGGTAACTCATCGGTTAGTTCGTCTATTGAAGAAGAAGTCGAAAAGCTGGTATGGGCGACTCGCTGGGGCGCTG ATACCGTAATGGACTTATCTACCGGCCGTAATATTCACCAAACCCGTGAGTGGATCTTACGCAACAGTCCAGTGCCTATT GGTACTGTGCCTATTTATCAGGCTTTAGAACGGGTCAATGGCGTTGCTGAGGATCTGAGCTGGCCAGTATTTAAAGACGT ACTGCTGGAACAGGCTGAGCAAGGTGTGGACTATTTTACGATTCACGCCGGCGTACTGCACGACTTCATTAAACTGACTG CAAAGCGAGTTACCGGCATAGTCTCCCGTGGCGGTTCGATAATGGCGAAATGGTGCATGGCGCACCAGCAAGAAAGTTTT CTTTATCAGCACTTCCGCGATATCTGCAAAATTTGTGCGAAATATGATGTGTCGCTGTCTTTAGGTGACGGCCTACGCCC CGGTTCCATTGCCGACGCCAACGATGAAGCTCAGTTTGCTGAACTGAGAGTACTAGGCGAGCTGACTCAAATTGCCTGGG AGTACGATGTGCAGGTGATGATAGAAGGCCCCGGCCATGTGCCCATGCATAAAATTCAGGAAAATATGGATGAGCAGTTA AAGCACTGTCACGGCGCGCCGTTCTACACCTTAGGGCCGCTAACCACCGATATCGCACCCGGTTACGACCACATTACCTC ATGTATTGGTGCTGCCATGATTGGCGCGTTTGGCTGCGCCATGCTCTGCTATGTTACCCCGAAGGAACACTTAGGCTTGC CTAACAAGGAAGATGTAAAACAGGGGATGATCGCTTACAAAATAGCGGCTCATGCGGCCGATTTAGCCAAAGGTCACCCA GGCGCTCAGGCGAGGGATGACGCTATGTCAAAAGCCCGCTTTGAATTCCGCTGGGAGGATCAATTTAATCTGGCGTTGGA TCCGGTTACCGCTCGCAGCTATCACGATGAGACACTGCCTCAGGATTCGAACAAAACCGCGCAGTTTTGCTCCATGTGCG GGCCAAAGTTCTGCTCCATGAAAATTTCACACGAGGTACGTCAGTACAACCCGGACACTCGAATTGATGTAAAAGTGAAA GACGCGGCGACCGAAGGAGCAGAATGA Protein sequence : MSTAPSNNRLNRQQAESFLSSLSGHYYPNSSREFISGSNKDIQVPFRRIHLSETLHQPTPGVKLPPNEPVDVYDTSSVYG DPDATIDVKAGLKKVRENWIQERHSENQQYNHGITQLAYARRGVITPEMEFIALRENMGRGHLKNPITPEFVRDEVASGR AIIPVNTHHPESEPMIIGRNFLVKVNANIGNSSVSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHQTREWILRNSPVPI GTVPIYQALERVNGVAEDLSWPVFKDVLLEQAEQGVDYFTIHAGVLHDFIKLTAKRVTGIVSRGGSIMAKWCMAHQQESF LYQHFRDICKICAKYDVSLSLGDGLRPGSIADANDEAQFAELRVLGELTQIAWEYDVQVMIEGPGHVPMHKIQENMDEQL KHCHGAPFYTLGPLTTDIAPGYDHITSCIGAAMIGAFGCAMLCYVTPKEHLGLPNKEDVKQGMIAYKIAAHAADLAKGHP GAQARDDAMSKARFEFRWEDQFNLALDPVTARSYHDETLPQDSNKTAQFCSMCGPKFCSMKISHEVRQYNPDTRIDVKVK DAATEGAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-177 | 66 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-177 | 66 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 6e-168 | 61 |
