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Name : serS (IL0663) Accession : YP_155053.1 Strain : Idiomarina loihiensis L2TR Genome accession: NC_006512 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 717536 - 718828 bp Length : 1293 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTAGACGCAAAATACTTCCGAGAGGAATTAGACCAGACCGCAAAAAAGCTAGCAACGCGAGGCTTTGACTTAGACGT TGCCAAATTACAAAAGCTGGAAGAGCAGCGCAAAGAGGTGCAGGTGCGCACCGAGCAGTTGCAGGCAGAGCGTAACAGCC GCTCGAAAGCCATTGGTAAGGCAAAAGCTTCAGGTGAAGACATACAACCTTTGTTAGATGCGGTAAGCGATTTAGGCGAG CAACTGGATAACGCTAAAGAAGAGCTAAAAGTTATCCAGCAAGAACTTAACGATATTATTATGGGTGTTCCGAACTTGCC GGCAGACGAAGTCCCGGAAGGTGCGGATGAAGATGAAAATCAGGAGGTCCTGACTTGGGGCAAGCCTAAGTCGTTCGACT TTGAAGTGAAAGATCATGTCGATTTAGGCGAAGCATTAGCCAAAGGTATGGACTTTGAAACGGCCGCGAAGCTCACTGGA GCACGCTTTGTGGTTATGCGTGGTGGTATCGCCCGCATGCATCGCGCTCTGACTCAGTTTATGCTGGATTTACATACTGA CGAGCATGGGTATCTTGAAACCTATGTGCCTTATATGGTGAACCAGGACTCATTATACGGAACCGGTCAGTTACCTAAGT TCGGTAAGGATTTATTCCATATTGAAGGCGAGTCTCAGGATCAAATTCCTATGTCGTTGATTCCAACGGCTGAAGTGCCG TTAACAAACTTATACCGTGATGAAATTGCTGACGAAGAAGAGCTACCGCTTAAGTTTACCGCGCATACGCCGTGTTTCCG CAGTGAAGCCGGTTCTCACGGTCGCGACACTCGTGGGCTTATTCGTCAGCATCAGTTTGATAAAGTGGAACTGGTCTGGT TGGTTAAACCTGAACAGTCGATGGATGCGCTGGAGCAATTAACAGGCCACGCCGAAACTGTGCTGCAAAAGCTTGAGCTG CCGTATCGAAAAGTACTGCTGTGTACTGGGGATATGGGCTTTGGGGCAGCTAAAACCTACGACCTGGAAGTTTGGTTGCC GGCGCAGGAAGCGTACCGTGAAATCAGCTCTTGCTCGAACATGCAGGACTTTCAGGCGCGCCGTATGCAGGCTCGTTTCC GTCGTAAAGGCGCGAAGAAACCTGAACTTATGCACACATTAAACGGCTCTGGTCTGGCTGTTGGCCGTGCGCTGGTAGCC GTGCTGGAAAACTACCAACAGGAAGACGGCTCAATTGTTGTGCCTGAGGTATTACGTCCTTACATGGGCGGTGTAGAAGT GCTTAAGGCTTAA Protein sequence : MLDAKYFREELDQTAKKLATRGFDLDVAKLQKLEEQRKEVQVRTEQLQAERNSRSKAIGKAKASGEDIQPLLDAVSDLGE QLDNAKEELKVIQQELNDIIMGVPNLPADEVPEGADEDENQEVLTWGKPKSFDFEVKDHVDLGEALAKGMDFETAAKLTG ARFVVMRGGIARMHRALTQFMLDLHTDEHGYLETYVPYMVNQDSLYGTGQLPKFGKDLFHIEGESQDQIPMSLIPTAEVP LTNLYRDEIADEEELPLKFTAHTPCFRSEAGSHGRDTRGLIRQHQFDKVELVWLVKPEQSMDALEQLTGHAETVLQKLEL PYRKVLLCTGDMGFGAAKTYDLEVWLPAQEAYREISSCSNMQDFQARRMQARFRRKGAKKPELMHTLNGSGLAVGRALVA VLENYQQEDGSIVVPEVLRPYMGGVEVLKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-101 | 55 |
