Gene Information

Name : IL0640 (IL0640)
Accession : YP_155030.1
Strain : Idiomarina loihiensis L2TR
Genome accession: NC_006512
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 694516 - 694719 bp
Length : 204 bp
Strand : +
Note : similar to AlpA

DNA sequence :
ATGAAATTAATGAAAGTCAAAGAAGTCATGCACGTAACCAGCCTAGCCCGCCCTACTATTTACAAGTACATGGCCAAAGG
ACAATTCCCAAAACCGGTATCTTTAGGTGGCCGAGCCGTGGCATGGGTAGCAGATGAAATTGATGACTGGATTATGCAGT
GCATTGCTGAGCGTGATGCGGAAAGTGATATAGAGGCTGATTAA

Protein sequence :
MKLMKVKEVMHVTSLARPTIYKYMAKGQFPKPVSLGGRAVAWVADEIDDWIMQCIAERDAESDIEAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 5e-13 50
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 7e-13 50
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 7e-13 50
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 7e-14 47
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 7e-13 45
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 7e-13 45
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 3e-13 43
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 2e-07 42
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 2e-07 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
IL0640 YP_155030.1 transcriptional regulator VFG1118 Protein 2e-13 50
IL0640 YP_155030.1 transcriptional regulator VFG1141 Protein 2e-13 45