Gene Information

Name : alpA (IL0639)
Accession : YP_155029.1
Strain : Idiomarina loihiensis L2TR
Genome accession: NC_006512
Putative virulence/resistance : Virulence
Product : prophage CP4-57 regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 694156 - 694362 bp
Length : 207 bp
Strand : +
Note : -

DNA sequence : 
ATGAGATTTTTAAGAATAAACGAAGTGAGAGAGCGCATAGGGCTTGGTAGAACGTCAATCTATAAAATGGTCAACGAAGG
CACCTTCCCTAAGCCGGTTCGAGTTTTAGGAAAAAAAGTAGCCTGGGTAGATTCAGAAGTCGATGAGTGGATGTTAGAGC
GCATAGCCGAACAACGTAGCGATACCATATCCGCAGTTAACTGCTAA

Protein sequence : 
MRFLRINEVRERIGLGRTSIYKMVNEGTFPKPVRVLGKKVAWVDSEVDEWMLERIAEQRSDTISAVNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 2e-11 53
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-11 51
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-11 51
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-11 51
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 3e-10 43
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 6e-10 43
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 6e-10 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
alpA YP_155029.1 prophage CP4-57 regulator VFG1118 Protein 9e-12 51
alpA YP_155029.1 prophage CP4-57 regulator VFG1141 Protein 2e-10 43