Gene Information

Name : soxR_1 (IL0631)
Accession : YP_155021.1
Strain : Idiomarina loihiensis L2TR
Genome accession: NC_006512
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 688506 - 688913 bp
Length : 408 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCATTGGTCAGTTGGCGCAGTTGGTAGGGGTCGAAACACAGACGATCCGCTTCTATGAACAGCAGGGCTTGTTGCC
GCCGCCTGATCGGCAGGACAACGGTTACCGTGTCTATACCGAGAAGCATGGTGAGGGGCTGGCCTTCATCCGTCGCTGCA
GAATCCTGGGCCTGTCACTGGCTGAGATTCACGAACTACAGAGCTATCAGGACGACCCTCATCAGCCTTGTACCGCCGTC
AACGCCTTGCTCGATGATCACATCTCTCATGTGCGGTCGCAGATAACCGCTCTGCAAGCGCTTGAGAAACAACTCGTTTC
ACTGAGAGCGAGTTGCAACGATGACCGGGAAGTTGAGGCGTGTGGGGTTCTTGCTGGAATTAGCGAAGGAAACATGCACC
AGCAGTAG

Protein sequence : 
MRIGQLAQLVGVETQTIRFYEQQGLLPPPDRQDNGYRVYTEKHGEGLAFIRRCRILGLSLAEIHELQSYQDDPHQPCTAV
NALLDDHISHVRSQITALQALEKQLVSLRASCNDDREVEACGVLAGISEGNMHQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-54 91
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-54 91
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-54 91
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-54 91
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-54 90
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 4e-54 90
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-54 90
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-29 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
soxR_1 YP_155021.1 MerR family transcriptional regulator BAC0301 Protein 5e-24 47
soxR_1 YP_155021.1 MerR family transcriptional regulator BAC0058 Protein 2e-28 47