Gene Information

Name : ugd (IL0538)
Accession : YP_154928.1
Strain : Idiomarina loihiensis L2TR
Genome accession: NC_006512
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 568049 - 569215 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTGCAGTAGCAGGTACAGGATACGTAGGTTTATCAAATGCGGTTCTCTTTGCACAACATAATCAGGTTACCGC
AGTCGACATAGACCAAGAAAAAGTAGAAAAAATAAATAAAAAACAATCACCTATAGTCGACAAAGAAATTCAGCATTTTT
TACAGGAAAAGCCCCTGAACCTCAGCGCCACCACCGACGCGCACGCGGCATACAAAAACGCCGACTTTGTGGTTATTGCC
ACCCCCACCGACTACGACCCGCAAACCAATTACTTCAACACCAAAACCGTTGAAAGCGTTATAAGCCAGGTAATAGAAGC
CAACCCAAATGCCGTTATGGTTATTAAGTCGACCATTCCGGTAGGGTATACACAGTCGCTAAAAGAAAAGTTTGGTACCA
ACAACATTCTGTTTTCACCAGAATTTCTGCGTGAAGGCAAAGCCTTGTACGACAACCTGCACCCGTCACGCATTATTGTC
GGCGAACGTTCAGAGCGCTCTGAAACTTTCGCAAACCTGCTAAAGCAGGGCGCCGAAAAGCAAAATATAGACACCCTGTT
TACCGATAGCACCGAAGCCGAAGCCATTAAGCTGTTTGCCAATACCTATTTAGCCATGCGTGTTGCCTACTTTAATGAGC
TAGACACCTACGCAGAAGTGCACGGTTTAGACACCAAACAAATTATTGAAGGCGTCTGCTTAGACCCGCGCATAGGTTCG
CATTACAACAACCCCAGCTTTGGTTACGGCGGCTATTGCCTGCCAAAAGACACCAAGCAGCTTCTCGCCAACTACGATAA
CGTGCCACAAACCCTAATTAAATCGATTGTGGACGCCAACCGTACCCGTAAAGACTTTATTGCCGACCAAATTATTGCCA
AACAACCCAAGGTAGTGGGCGTGTACCGCCTGGTGATGAAGTCGGGCTCAGACAACTTTCGGGCGTCGGCCATACAGGGC
ATTATGAAGCGCATTAAAGCTAAAGGCATAGAAGTGGTAGTGTACGAACCAGAGTTAAAAGAGGAGCGCTTCTATAACTC
GCGGGTTATTAATAACCTGACAGAATTTAAAGCCGTGTCGGAAATTATACTCAGTAACCGGCTGGCCGATGACTTAAAAG
ACGTGCAAGAAAAAGTGTATACGCGCGACTTGTTTAACAACGACTAA

Protein sequence : 
MKIAVAGTGYVGLSNAVLFAQHNQVTAVDIDQEKVEKINKKQSPIVDKEIQHFLQEKPLNLSATTDAHAAYKNADFVVIA
TPTDYDPQTNYFNTKTVESVISQVIEANPNAVMVIKSTIPVGYTQSLKEKFGTNNILFSPEFLREGKALYDNLHPSRIIV
GERSERSETFANLLKQGAEKQNIDTLFTDSTEAEAIKLFANTYLAMRVAYFNELDTYAEVHGLDTKQIIEGVCLDPRIGS
HYNNPSFGYGGYCLPKDTKQLLANYDNVPQTLIKSIVDANRTRKDFIADQIIAKQPKVVGVYRLVMKSGSDNFRASAIQG
IMKRIKAKGIEVVVYEPELKEERFYNSRVINNLTEFKAVSEIILSNRLADDLKDVQEKVYTRDLFNND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-94 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_154928.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 4e-103 56