Gene Information

Name : siaA (IL0520)
Accession : YP_154912.1
Strain : Idiomarina loihiensis L2TR
Genome accession: NC_006512
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine 2-epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0381
EC number : -
Position : 546134 - 547273 bp
Length : 1140 bp
Strand : +
Note : sialic acid capsule biosynthesis protein

DNA sequence :
ATGAAAAAGAAGGTGCTTTTCGTAACCGGTACCCGTGCCGACTTTGGCAAACTGAAAAGTTTAATTGAAGTCACCGATAA
AGCGGACGAGTTTGAAGTTCAGCTGTTTATTACCGGCATGCACATGATGTCCCGCTACGGCATGACTTCCATAGAAGTCG
AGCGCCTGAAAATAGCTTCCAGCTATAAGTACATTAACCAGACCAAAAACGACACCATGGACGTGGTTCTGGCTAAAACC
ATTACCGGTTTGTCGGACTACATTCACGAGAATAACCCGGATGTGATTGTGGTTCACGGCGACCGGGTAGAAGCCATGGC
TGGTGCCATTGTGGGTAGCCTGAACAACATTCTAGTGGCTCATATTGAAGGCGGCGAGGTGTCGGGCACCATTGACGAGC
TTATTCGTCACTCCATATCCAAAATGGCGCACACGCACTTTGTGTCTAACAGCGAAGCGCAGGAGCGACTGGTGCAGCTG
GGCGAGGCGAAGTCGTCCATTTTTACCATCGGCTCACCCGACCTCGACGTGATGAATTCACCGAATTTGCCTTCGCTGGA
GACTGTAAAAGAAAAGTACGACATTGCGTTTAAAGACTACTCGGTGTTTATGTACCACCCGGTGACCACCGAGCTTGAGT
CGCTGGAGTCGAATATCAAATCGACTGTTGATGCCATGCTGGAAAGTGATGAAAACTTTGTGGTGGTGTACCCCAATAAC
GACCACGGCACCGACACCATTCTGGCGGAGTTAAAGCGCTGCGAGAACCATCCGCGTTTTCGCATTTACCCCAGTATTCG
GTTCGAGTACTTTCTGGTGCTGCTGAAAAACGCCAATATGATCATCGGTAATTCAAGCGCTGGCGTTCGCGAAGCGCCGT
TTTACGGCATACCCACTATTAACCTGGGCAGCAGACAGCAAAGCCGGGCTACAGCCGAGTCTATCTTAAACGTAGAAGAG
CAGACTCCGGCTATTTTAGAAGCCATAAAAACCTTTAAAACCAAACGCTTCGAGCCTTCGTCGGAATTTGGTGATGGCAA
TAGCGCAGAGGGCTTTATCAGTACCTTGCGATCGGAAGCGTTCTGGGCAATATCCAAGCAAAAAGTTTTTGTAGACTGGG
ACAAACGTGAAAAAAGTTAA

Protein sequence :
MKKKVLFVTGTRADFGKLKSLIEVTDKADEFEVQLFITGMHMMSRYGMTSIEVERLKIASSYKYINQTKNDTMDVVLAKT
ITGLSDYIHENNPDVIVVHGDRVEAMAGAIVGSLNNILVAHIEGGEVSGTIDELIRHSISKMAHTHFVSNSEAQERLVQL
GEAKSSIFTIGSPDLDVMNSPNLPSLETVKEKYDIAFKDYSVFMYHPVTTELESLESNIKSTVDAMLESDENFVVVYPNN
DHGTDTILAELKRCENHPRFRIYPSIRFEYFLVLLKNANMIIGNSSAGVREAPFYGIPTINLGSRQQSRATAESILNVEE
QTPAILEAIKTFKTKRFEPSSEFGDGNSAEGFISTLRSEAFWAISKQKVFVDWDKREKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
synX NP_273134.1 polysialic acid capsule biosynthesis protein SynX Not tested IHT-A Protein 3e-79 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
siaA YP_154912.1 UDP-N-acetylglucosamine 2-epimerase VFG0254 Protein 1e-79 48