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Name : mshE (IL0370) Accession : YP_154762.1 Strain : Idiomarina loihiensis L2TR Genome accession: NC_006512 Putative virulence/resistance : Virulence Product : Type II secretory pathway, ATPase Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 385908 - 387623 bp Length : 1716 bp Strand : + Note : MshE-like DNA sequence : ATGAAGCGTCCTCGTCTTAAAATGCGGTTAGGCGATTTGCTTGTTCACGAGCAAATCATCAGTGAAGAACAACTGCAAAA GGCACTAGAGCAACAGCGTATTAGCGGACGTAAGCTGGGCGCGACTTTAACCGATCTAGGCTATATCTCTGAGCAACAGT TACTCGAATTCCTGGCGCAGCAACTTAAACTGCCGCTTATCAGTATTTCTGAACGTAAAATTCCGGCTGAAGCTTTTAAA TTGCTGCCCGAAGTTCAGGCGCGTCGGCATCGGGCGTTGGTTATAGAAGCCAGCGAAGAGCAGGCATTAGTGGGTATGAG TGACCCGGCCGACCTGTCCTCAATTGACGCCATTAATCAATTATTGGCTCCGCGCCAGGTTGAACTTGCCGTGGTTCCCG AAGGCGAGTTGATGCAGGCCTTTGATAACCTCTATCGACGCACCAAAGAAATTGAAACCTTCGCCAGTCAGCTGCAGGAC GAATACGAAGATACCAGTGAGTTTGAGCTGGGGCAGTTAAGCCTCGATGACGATACTGATGAAGCCACGGTGGCTAAATT ACTGCAGTCCATTTTTGAGGATGCGGTGCAAGTTCGAGCCTCGGATATTCACATAGAGCCGGACGACCGTAAATTACGGA TTCGCCAACGTGTGGACGGTGTATTGCAGGAAAATGTGCTGGAAGAAACCAACATTGCCAATGCGCTGGTGTTACGTCTG AAGCTTATGGCCGGGCTGGATATTTCTGAACGACGCCTGCCGCAGGACGGCCGGTTTAATATTAAAATTCGCAAACACAG TATCGACGTGCGGGTATCAACCATGCCGGTGCAATACGGCGAGTCCTGCGTGTTGCGTCTGCTGGACCAATCTGCCGGGC TGTTGTCGCTGGAACAAACCGGTATGCCTGCTTCTATTGTTAAGCGTATACGGGCTTTAATTAAACGTCCGCATGGCATG TTGCTGGTAACTGGGCCTACCGGTTCGGGTAAAACCACAACGCTTTATGGTGCACTTAGTGAGCTGAATACCGAAGGCAA AAAGGTGATTACGGTTGAAGACCCGGTTGAGTACCGCTTGCCGCGTATTTCGCAAGTGCAGGTGAACAGTAAAATTGGGT TGGATTTCTCGCGGGTTCTGCGCACTACTTTACGTCAGGATCCGGACATTATTATGGTCGGTGAGATGCGCGACCACGAA ACGGTTGAAATTGGTTTGCGCGGCTCTATTACCGGTCATTTAGTTTTATCTACTCTGCATACCAACGATGCCATTACCAG TGCCATGCGCCTGATTGACATGGGCGCACCGCCGTATTTGGTCGCTGCTGCGTTGCGAGGCATATTAGCTCAGCGCCTGG TGCGCCGGGTATGCGATAAATGTGCAGAGAGTTACCAGCCGGATGAAGCCGAAAGTCAGTGGCTGGAGCATTTACGTGAG GGTAGCTCGGACTATTCTTTTAAACGCGGAGTTGGTTGCCAGACATGCAACCATACCGGCTACCGTGGGCGCATAGGTGT GTTTGAACTGCTGGAAATGAATACGCCAATGATGGATGCTTTGCGTGATGGTAATACGCGAGAGTTTGCAATAGCTGCGA AAGCGCATCCGGGTTATCAGTCTATGGCCACGGTTGCACTGGATTATGCCCGTGAAGGTATTACCAGCGTCGACGAAGTC TTGTTTCTGGCTGAAAGTGTTGAGGACAGTATCTGA Protein sequence : MKRPRLKMRLGDLLVHEQIISEEQLQKALEQQRISGRKLGATLTDLGYISEQQLLEFLAQQLKLPLISISERKIPAEAFK LLPEVQARRHRALVIEASEEQALVGMSDPADLSSIDAINQLLAPRQVELAVVPEGELMQAFDNLYRRTKEIETFASQLQD EYEDTSEFELGQLSLDDDTDEATVAKLLQSIFEDAVQVRASDIHIEPDDRKLRIRQRVDGVLQENVLEETNIANALVLRL KLMAGLDISERRLPQDGRFNIKIRKHSIDVRVSTMPVQYGESCVLRLLDQSAGLLSLEQTGMPASIVKRIRALIKRPHGM LLVTGPTGSGKTTTLYGALSELNTEGKKVITVEDPVEYRLPRISQVQVNSKIGLDFSRVLRTTLRQDPDIIMVGEMRDHE TVEIGLRGSITGHLVLSTLHTNDAITSAMRLIDMGAPPYLVAAALRGILAQRLVRRVCDKCAESYQPDEAESQWLEHLRE GSSDYSFKRGVGCQTCNHTGYRGRIGVFELLEMNTPMMDALRDGNTREFAIAAKAHPGYQSMATVALDYAREGITSVDEV LFLAESVEDSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-81 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-81 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mshE | YP_154762.1 | Type II secretory pathway, ATPase | VFG1876 | Protein | 1e-84 | 43 |
| mshE | YP_154762.1 | Type II secretory pathway, ATPase | VFG2426 | Protein | 3e-63 | 42 |
| mshE | YP_154762.1 | Type II secretory pathway, ATPase | VFG0182 | Protein | 3e-86 | 42 |
| mshE | YP_154762.1 | Type II secretory pathway, ATPase | VFG2048 | Protein | 2e-81 | 41 |
