Gene Information

Name : recG (IL2374)
Accession : YP_156755.1
Strain : Idiomarina loihiensis L2TR
Genome accession: NC_006512
Putative virulence/resistance : Resistance
Product : DNA helicase RecJ
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 2544023 - 2546104 bp
Length : 2082 bp
Strand : -
Note : -

DNA sequence :
GTGGCGGTAAAAGGACTGCAGCACATTCCACTGACGGTACTTAAAGGTGTGGGCGAAAAGGTTGCGGTTAAGCTGCGCAA
GCTTGGCTTAGCCTCTGTCAGTGATGCACTGTTGCATCTGCCGTTGCGGTACGAGGATCGTACTCAGGTAACTGACGTTG
CAAATTTACGTGCGGGTGTGGCGACCAATGTTTTGGTCACGGTGCGGCACGCCGATATCAAGTACGGTCGTAAGCGTATG
CTGATTTGTCAGGCCAGCGACGAAACCGGCAGTATCAGTCTGCGGTTTTTTCAATTTAGCGCGGCTCAGCTAAAGCAATT
CGCACAAGGCACGCAGTTACTAGCCTTTGGCGAAGTGCGTCGGGGCATGACCGGCTGGGAGATGGTTCACCCCGAGTACC
GAATGGTCAAAGCTGGCGAGCCATTGAATATGCAGGAAACTCTGACGCCGGTCTACCCCATGACAGAAGGCGTGACTCAG
GGAATTTTGCGCAAGATCATCGAGCAGGCACTGACGTACCTTCAGCCCGGCTCTTTACCTGAACTGCTGCCTGAAAATTT
AAGACCCCATCAACTTTCTTTAGAGCAGGCTATTTTGACTCTGCACCGGCCGCCGGTGGATGTTCCCCTGGCACTGCTGG
AGCAAGGCGAGCATCCCGCGCAGCAGCGCCTGGCATCGGAAGAACTTATTGCTCACCAGTTAAGTTTGCTGCAGTTACGC
CAGGCTCGACAGGCTCAGGCGGGCTTTACCATAAAAGGCAATGGTGCGTTACAAGAGGCATTTTTAAAGCAGTTGCCGTT
TTCACCCACTGGCGCGCAGACAAGAGTGGTGAAAGAAATTACCAGCGATATGGCGCAAGGTCAGCCAATGATGCGACTGG
TGCAGGGTGATGTCGGCTCAGGCAAAACTCTGGTTGCTGCGCTCAGCGCTCTGGCAGCCATTGAAGCTGGATATCAGGTG
GCTTTAATGGCGCCGACCGAGCTTTTGTCTGAACAGCACGCCATTACTTTTAGCCAGTGGCTGATGCCCCTGGGTATTAA
TGTCGCTTGGTTGAGCGGCAAATCCAAAGGTAAGTCCCGTCGGGAATTGCTGGCACAGTTAAAGCAGGGAGATATTCATT
TACTGGTTGGTACCCACGCGTTGTTTCAGGCGGATGTTGAGTATCGGCGCCTGGCATTGGTGATTATTGACGAACAGCAC
CGTTTTGGTGTGCACCAGCGGTTACAATTACGCGAAAAAGGCGTTCAGGCCGGCGTGCATCCTCACCAGTTAATTATGAC
TGCAACACCCATCCCGCGAACTTTGGCTATGACAGCGTATGCGGATTTAGCCACATCAGTTATTGATGAATTGCCGCCCG
GACGCACACCGGTAACCACGGTTGCCATTCCGGATACCCGTCGGGAACAAATTGTGGAGCGTGTGCGGGAGGTCTGTGCC
ACTGAAGGCCGTCAGGCGTATTGGGTTTGTACCCTTATTGAAGAGTCCGATGTACTTGAATGTCAGGCGGCAGAAGACAC
CGCCAATGACTTGCAGGAGCAATTGCCGGGCTTGAGTATTGGCCTGGTGCATGGCCGGCTTAAACATGAGCAGAAAGAAC
AGGTGATGCAGGCGTTTAAAGCGGGTGATATTGACTTATTGGTCGCAACGACGGTCATAGAGGTTGGGGTGGATGTTCCC
AACGCGTCGCTCATGATTATTGAAAACCCGGAACGGCTGGGCTTAGCTCAGTTACACCAGTTGCGCGGCCGCGTTGGCCG
GGGCTCTGTAGCCAGTCATTGCGTGCTGCTGTATCACAGTCCGTTATCGCAAACTGCACAGCAGAGGCTGGGCGTTTTAC
GCGAAAGTAACGACGGTTTTGTGATTGCACAGCGCGATCTGGAAATTCGTGGGCCGGGTGAATTGCTAGGCCACCGGCAG
ACAGGGTTAGCTGAATTAAAAGTGGCTGACTTAGAGCGCGATGAAGCGTTAATACCAGAAGCCCAAAATATTGCTCAGCA
CGTATTAGAGCATTATCCGCAAAGCGCAGAAGCGCTAATTGAGCGTTGGTTACCGCGTCGTGACCACTATGCTCAGGTGT
GA

Protein sequence :
MAVKGLQHIPLTVLKGVGEKVAVKLRKLGLASVSDALLHLPLRYEDRTQVTDVANLRAGVATNVLVTVRHADIKYGRKRM
LICQASDETGSISLRFFQFSAAQLKQFAQGTQLLAFGEVRRGMTGWEMVHPEYRMVKAGEPLNMQETLTPVYPMTEGVTQ
GILRKIIEQALTYLQPGSLPELLPENLRPHQLSLEQAILTLHRPPVDVPLALLEQGEHPAQQRLASEELIAHQLSLLQLR
QARQAQAGFTIKGNGALQEAFLKQLPFSPTGAQTRVVKEITSDMAQGQPMMRLVQGDVGSGKTLVAALSALAAIEAGYQV
ALMAPTELLSEQHAITFSQWLMPLGINVAWLSGKSKGKSRRELLAQLKQGDIHLLVGTHALFQADVEYRRLALVIIDEQH
RFGVHQRLQLREKGVQAGVHPHQLIMTATPIPRTLAMTAYADLATSVIDELPPGRTPVTTVAIPDTRREQIVERVREVCA
TEGRQAYWVCTLIEESDVLECQAAEDTANDLQEQLPGLSIGLVHGRLKHEQKEQVMQAFKAGDIDLLVATTVIEVGVDVP
NASLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHSPLSQTAQQRLGVLRESNDGFVIAQRDLEIRGPGELLGHRQ
TGLAELKVADLERDEALIPEAQNIAQHVLEHYPQSAEALIERWLPRRDHYAQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 9e-97 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
recG YP_156755.1 DNA helicase RecJ BAC0356 Protein 0.0 60