Name : pulD (IL2026) Accession : YP_156407.1 Strain : Idiomarina loihiensis L2TR Genome accession: NC_006512 Putative virulence/resistance : Virulence Product : Type II secretory pathway, component PulD Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 2168106 - 2170232 bp Length : 2127 bp Strand : - Note : - DNA sequence : ATGACAGTGGCAAAGAGTGGCTTAAAAGCATGGTTGGGAGCTCTCGGTTTGGCATTAACACTGATGAGTTCACCATTAAG CAGCGAAGAATATGCCGCCAGTTTTAAAAATACTGATATTAACGAGTTTATTCAGGTTGTCGGCCGAAACTTAGGTAAAA CCATCATTATCGACCCTAACGTGCGGGGCAAAATAGATGTGCGCAGCTATGATGTGATGGATGAAGAGCAGTACTATCAG TTTTTTCTTAATGTTCTTGAGGTCTACGGATTTGCCACTGTTGAAATGGAGTCCGGTGTCCTGAAAGTCATTCGTGATAA AGACGCAAAAACCTCTTCGTTGCCTGTTATTGGTAGTGACACAAAAATGCTGGGCGACACAATGGTGACCCGGGTTGTGC CGGTAGAGAATGTCTCCGTAAGGGAGCTTGCTCCTTTATTGCGTCAGCTAAATGACCAAAGCGGTGGCGGTATGGTCGTC AGTTATGACCCATCAAATGTGATCATGATGACCGGGCGCGCTGAAACCGTGCAGCGTTTAGTAGAGATTATTGAGCGGGT GGATCGGGCTGGCGATCAAGATGTTGATATGATTAGTCTGGAGTATGCGTCAGCCAGTGAAATTGTTCGTATAGCTCAGT CGCTGTTCGAGAAAAATAATGAAGGCGTACCGGCGTTACTTATTCCTAAAATTGTTGCTGATGAGCGCAGTAATAGCGTT ATTGTTAGCGGTGAGCCCCGTGCCCGTGCCCGCGTCGTTAAGTTGATTAAACAGCTTGATCAGGACTTAAAAACCGAAGG TAACACTCGTGTTTTCTACTTAAAATATGCGAAAGCACCTGAAGTAGTTGAGGTGTTGAAAGATGTCAGCCGTTCTATTC AGGCCGAAGTCGAGCAACAGTCCGGTACCGGTAATGCAACTCAGCGCCGTCGTACCGGAGGTGATGAAACGGTCAGTATC AGCCCGCATGAGCCGACAAACTCGGTGGTCATTACCGCTCAAAAAGACATGCTGGCGTCGCTGGAAAAAGTGATTAGGGA CTTAGACATTCGCCGTGCTCAGGTTCAGGTTGAAGCTATTATTGTCGAAATTATGGAAGGCGATAACGTTGACTTTGGCG TGCAGTGGATCAGTGAAGACGGCGGTATGGTTCAATATAATAATGGTAATCAGGTACCTATCGGGAGTTTGGCCGCGGGT GCTTATCAAGCACGTGAAAGGGAAGGTACAACGACGACCCGGATAACAGATGGAGGAGTCGAGGTGACGACGACAGAACC GGATGAGCCTGGTGATGTCTCGTTGCTGGCGAATTTACTGGGCTCGGTAAACGGCATGATGTTCGGCACCATTCAGAACG ACTGGGCAGCGGTGGTTCAGGCCGTTACTCAGGATACTCGCTCAAATATTCTGGCCACGCCAAGTATTGTTACCGTCGAC AACGAAGAAGCGAGCTTCCTGGTCGGTCAGGAAGTCCCTACGATTAGTGGCTCTACTACGGGGGATAACAATGACAACCC TTTTCAGACGGTTGATCGCACCGAGATAGGTATTAAGTTAAAGGTAACGCCTCAAATTAACGAGGGGGACGCCGTGCAAA TGACGATAGAACAGGAAGTGTCCAGTTTAAGCGGTGCCACTGCGGTTGACGTGATTATTAATAAGCGGGAACTGAAAACC ACGGTTATGGCTGACGACGGCGAGACCATTGTACTGGGCGGTCTAATTGACGAAGACGTGCAGGAGTCGGTCTCTAAAGT TCCTTTATTAGGCGACATACCAATTTTAGGTAAATTATTCAGCTCTACGTCAACCTCTAAACAAAAGCGCAACCTGATGG TTTTTATCCGTCCAACCATAGTCCGTGACGGTAACCGTATGCGTGAGTTAAGTTCGGCAAAGTACAATTATATGCGGGCA CTGCAATTGGATGAACGTTCGCGCGGTATCTCTCTAATGCCTTCTGAGGATTCACCGTTGCTTAACGACTGGGACAGTGA ACTGACGTTACCGCCGGGCTTTGACGAATATCTGAAAAAACAAGGTAGCGAGAAGAGCGACAAGAAGAATAGCGAAGAAA GCGATAAAGAAATCGGCGAACAAAATGAAGAGCAGCAAAATGACTGA Protein sequence : MTVAKSGLKAWLGALGLALTLMSSPLSSEEYAASFKNTDINEFIQVVGRNLGKTIIIDPNVRGKIDVRSYDVMDEEQYYQ FFLNVLEVYGFATVEMESGVLKVIRDKDAKTSSLPVIGSDTKMLGDTMVTRVVPVENVSVRELAPLLRQLNDQSGGGMVV SYDPSNVIMMTGRAETVQRLVEIIERVDRAGDQDVDMISLEYASASEIVRIAQSLFEKNNEGVPALLIPKIVADERSNSV IVSGEPRARARVVKLIKQLDQDLKTEGNTRVFYLKYAKAPEVVEVLKDVSRSIQAEVEQQSGTGNATQRRRTGGDETVSI SPHEPTNSVVITAQKDMLASLEKVIRDLDIRRAQVQVEAIIVEIMEGDNVDFGVQWISEDGGMVQYNNGNQVPIGSLAAG AYQAREREGTTTTRITDGGVEVTTTEPDEPGDVSLLANLLGSVNGMMFGTIQNDWAAVVQAVTQDTRSNILATPSIVTVD NEEASFLVGQEVPTISGSTTGDNNDNPFQTVDRTEIGIKLKVTPQINEGDAVQMTIEQEVSSLSGATAVDVIINKRELKT TVMADDGETIVLGGLIDEDVQESVSKVPLLGDIPILGKLFSSTSTSKQKRNLMVFIRPTIVRDGNRMRELSSAKYNYMRA LQLDERSRGISLMPSEDSPLLNDWDSELTLPPGFDEYLKKQGSEKSDKKNSEESDKEIGEQNEEQQND |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-159 | 53 |
gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 2e-167 | 53 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
pulD | YP_156407.1 | Type II secretory pathway, component PulD | VFG2047 | Protein | 3e-156 | 53 |