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Name : rplS (IL1723) Accession : YP_156105.1 Strain : Idiomarina loihiensis L2TR Genome accession: NC_006512 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1854748 - 1855107 bp Length : 360 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGGCAAAAGTTAGCCAAAGCATCATTAAGGCTCTTGAAGAAGAGCAGATGAAACAAGATTTACCTGAGTTTGCACCAGG TGACACTGTTGTTGTAAATGTAAAAGTAAAAGAGGGTAACCGCGAACGTCTTCAGGCGTTTGAAGGTGTTGTTATCCGTG TTCGTAACCGCGGTCTGCATTCAGCGTTCACAGTACGTAAAGTATCGAACGGTGAAGGCGTAGAGCGTACTTTCCAAACG CACAGCCCATTAGTTGACAGTATTAAAGTCAAACGTCGTGGTGCGGTTCGTCGCGCGAAACTGTACTACTTGCGTGAGCG TTCTGGTAAGTCTGCACGTATCCGCGAGAAGCTGTCTTAA Protein sequence : MAKVSQSIIKALEEEQMKQDLPEFAPGDTVVVNVKVKEGNRERLQAFEGVVIRVRNRGLHSAFTVRKVSNGEGVERTFQT HSPLVDSIKVKRRGAVRRAKLYYLRERSGKSARIREKLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 3e-33 | 75 |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-21 | 56 |
