Gene Information

Name : tra5_5 (IL1628)
Accession : YP_156010.1
Strain : Idiomarina loihiensis L2TR
Genome accession: NC_006512
Putative virulence/resistance : Unknown
Product : transposase Tra5-like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1741414 - 1742037 bp
Length : 624 bp
Strand : +
Note : -

DNA sequence :
ATGAAACTAAGCCAGCTTAAGGCTCAGGTTGGTTATCGTAAGCCTCGCCACCGTGGTGGTGTCTCTCATATCGTTACGCC
TAATAGATTAAACCGGGTGTTTAATACTGAGCAGCCTAACCAGGCCTGGGTAACCGATGTCACCTACATTAAAACCCATG
AAGGCTGGCTCTACTTAGCGGTGGTTGTTGATCTGTTCTCGCGACGAGTGATCGGCTGGTCAATGCAGCAACGAATGACA
AAAGAGTTAGTTCTTGATGCGCTACTCATGGCGATATGGCGACGAAAGCCTAAACAGAAAGTCGTGGTGCACTCCGACCA
AGGAAGCCAATATACAAGCCATGACTGGAGCTCATTCCTAAAGAGCAATAATCTGGAAGGCAGCATGAGTCGCCGTGGAA
ATTGTCATGATAACGCTGTTGCTGAGAGCTTTTTCCAGCTACTTAAACGAGAGCGTATTAAGCGGAAAATATATTCAAAC
CGAGCTGAAGCTCGTCGAGATGTGTTTGACTATATTGAGATGTTTTACAACTCGAAACGCCGGCACAGTTCCAATGATCA
GTTATCGCCGGTAGAGTATGAAAAACGTTTTGAAAAAACGGCTACTGAGTGTCTAGTGAACTAG

Protein sequence :
MKLSQLKAQVGYRKPRHRGGVSHIVTPNRLNRVFNTEQPNQAWVTDVTYIKTHEGWLYLAVVVDLFSRRVIGWSMQQRMT
KELVLDALLMAIWRRKPKQKVVVHSDQGSQYTSHDWSSFLKSNNLEGSMSRRGNCHDNAVAESFFQLLKRERIKRKIYSN
RAEARRDVFDYIEMFYNSKRRHSSNDQLSPVEYEKRFEKTATECLVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAD44733.1 TnpA Not tested SHI-2 Protein 3e-37 50
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-38 48
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-38 47
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 2e-31 44
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 2e-31 44
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 8e-31 43
unnamed CAI43898.1 putative transposase Not tested LEE Protein 8e-31 43
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 9e-31 43
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 5e-29 42
unnamed AAC31485.1 L0006 Not tested LEE Protein 3e-29 42
Z5089 NP_290241.1 transposase Not tested LEE Protein 5e-29 42
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-29 42
CDC7B_2039 YP_005163480.1 transposase-like protein Not tested Not named Protein 1e-21 41
CDCE8392_1961 YP_005134492.1 transposase-like protein Not tested Not named Protein 1e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tra5_5 YP_156010.1 transposase Tra5-like protein VFG1484 Protein 9e-32 44
tra5_5 YP_156010.1 transposase Tra5-like protein VFG0785 Protein 1e-29 42