Gene Information

Name : IL1389 (IL1389)
Accession : YP_155778.1
Strain : Idiomarina loihiensis L2TR
Genome accession: NC_006512
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1492871 - 1493806 bp
Length : 936 bp
Strand : -
Note : contains two domains associated with photoreactivation

DNA sequence : 
ATGGTAAAGTTAAAAGTGGGTATTAGTTCCTGTTTAATGGGCGACGAGGTCCGGTTTGACGGGGGACACAAGAAGTCCGC
ATTCTGTGTTGATGAATTAAGTCGACACATTGAACTGGTACGGTTTTGCCCGGAAGTTGGTATTGGAATGCCGGTGCCAA
GACCGACTATTCGCCTTGAGCAACATGACGATGTACAGGCGGTAGTGCCCAAAACCGGTGAAAATGTTACGTCACAGCTA
GCTGCCTTTGCCGATAAGGTTCAGGTTAAAGTAGAGCAGTTAAGCGGTTACATTCTATGCGCAAAATCTCCCAGCTGCGG
TATAGAGCGGGTCAAGTTATATGATCCGGAAACCGGGCATGAACAAAAAGCTGGAATGGGAATTTTTGCCGCGCGGCTTA
AAGAAAAGAATCCCGCTTTGCCTTTAGAAGAAGATGGCCGGCTCAATGACCCGCATTTACGTGAAAACTTTGTGATGCGG
GTTTACGTGTTTAGTCAATGGAAAGAAATGACGCAGAAACTGTCCAAACATCAGCTTTTGCAGTTTCACCAACGCTGCAA
GCTACTTTTGTTAGCCCATAATCAGCAACGTTACCGCGAGTTGGGGAAACGTCTGGGGGAACAGGAAAGCATCGACAGTG
CCTTTGCGGAGCAATATATCATTGATGTGATGGACGCTTTATCAAAACCGGCGTCGCGTAAGAACCACACCAATGTGCTT
CAACATATCCAGGGTTATTTTAAAGCGGATCTCGCCCATGAAAGACGAGAAGAGCTGAGTGATATCATTCTCCAGTATCA
CGATGGCATTCTCCCTCTGATGTCCCCTCTAACGTTAATACGACATTATTTGCGCGAGTTTCCGAAAGAATATTTAGAAG
GGCAATGGTATCTGACGCCATATCCCGATGATTTAAAATTACGTTATGGGCTGTAG

Protein sequence : 
MVKLKVGISSCLMGDEVRFDGGHKKSAFCVDELSRHIELVRFCPEVGIGMPVPRPTIRLEQHDDVQAVVPKTGENVTSQL
AAFADKVQVKVEQLSGYILCAKSPSCGIERVKLYDPETGHEQKAGMGIFAARLKEKNPALPLEEDGRLNDPHLRENFVMR
VYVFSQWKEMTQKLSKHQLLQFHQRCKLLLLAHNQQRYRELGKRLGEQESIDSAFAEQYIIDVMDALSKPASRKNHTNVL
QHIQGYFKADLAHERREELSDIILQYHDGILPLMSPLTLIRHYLREFPKEYLEGQWYLTPYPDDLKLRYGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-72 50
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-72 50
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-72 50
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 9e-73 50
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-72 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
IL1389 YP_155778.1 hypothetical protein VFG0490 Protein 7e-73 50