Gene Information

Name : sirA (SPA0922)
Accession : YP_150213.1
Strain : Salmonella enterica ATCC 9150
Genome accession: NC_006511
Putative virulence/resistance : Virulence
Product : invasion response-regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 999318 - 999974 bp
Length : 657 bp
Strand : +
Note : similar to Salmonella typhi Ty2 invasion response-regulator

DNA sequence : 
TTGATCAACGTTCTTCTTGTTGATGACCACGAACTGGTGCGCGCAGGGATACGACGCATTCTTGAAGATATAAAGGGCAT
TAAAGTTGTCGGTGAAGCGTGCTGCGGAGAGGATGCGGTAAAATGGTGCCGTACTAACGCCGTTGACGTCGTGCTGATGG
ATATGAACATGCCCGGTATTGGCGGCCTTGAGGCGATGCGTAAAATTGCCCGATCGACAGCGGATATCAAAGTGATCATG
CTGACCGTCCATACGGAGAACCCGTTGCCCGCCAAAGTGATGCAGGCTGGCGCAGCTGGCTATCTCAGCAAAGGCGCTGC
GCCTCAGGAGGTGGTGAGCGCTATTCGTTCGGTGTATTCCGGGCAACGTTATATCGCCTCCGATATCGCTCAACAGATGG
CGCTCAGTCAGATTGAGCCTGCAAAAACGGAAACGCCGTTCGCCAGTTTGTCTGAACGCGAGTTGCAGATTATGCTGATG
ATCACCAAGGGCCAGAAGGTCAATGAGATTTCAGAACAGCTGAATCTCAGTCCTAAAACGGTGAACAGCTATCGCTATCG
TATGTTCAGTAAATTAAACATTCATGGTGATGTTGAGCTGACTCACCTGGCAATCCGCCATGGCCTGTGTAATGCGGAGA
CGTTAACAAGCCAGTGA

Protein sequence : 
MINVLLVDDHELVRAGIRRILEDIKGIKVVGEACCGEDAVKWCRTNAVDVVLMDMNMPGIGGLEAMRKIARSTADIKVIM
LTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPAKTETPFASLSERELQIMLM
ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLTSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 6e-46 49
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 6e-46 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sirA YP_150213.1 invasion response-regulator VFG1889 Protein 5e-54 51