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Name : treC (SPA4254) Accession : YP_153301.1 Strain : Salmonella enterica ATCC 9150 Genome accession: NC_006511 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 4425173 - 4426825 bp Length : 1653 bp Strand : - Note : similar to Salmonella typhi CT18 trehalose-6-phosphate hydrolase DNA sequence : ATGACTATCCCCCTCTGGTGGCAAAACGGCGTTATTTATCAGATCTACCCGAAAAGTTTTCAGGACACGACCGGCAGCGG CACCGGCGATTTACGCGGCGTCACGCAGCGCCTTGACTATCTACAGCGACTCGGCGTGGACGCCATCTGGCTCACGCCGT TTTATATCTCGCCGCAGGTGGATAACGGTTATGACGTCGCAAATTATACGGCTATCGACCCGACCTACGGCACGCTGGAT GATTTTGACGAGCTGGTCGCGCAGGCGAAAGCACGCGGCATTCGCATCATCCTGGATATGGTGTTTAACCATACTTCTAC CCAGCACACCTGGTTTCGCGAAGCGCTGAACAAAGAGAGCCCATACCGTCAGTTTTACATCTGGCGCGACGGCACGCCGG ATGTCTGCCCGAATAACTGGCAATCCAAATTTGGCGGCAGCGCCTGGCGCTGGCATAGCCAGAGCGAACAATATTATTTA CACCTTTTCGCGCCTGAACAGGCCGACCTGAACTGGGAAAACCCCGCCGTACGCGCCGAGCTGAAAAAGGTTTGTGAATT CTGGGCCGATCGCGGCGTGGATGGCCTACGTCTGGACGTGGTGAACCTGATCGCCAAAGATCAGGATTTTCCTGACGATC CGACGGGCGACGGACGCCGCTTTTATACCGACGGGCCGCGCGCGCATACGTTTTTACGCGAAATGAACCGTGACGTTTTT ACGCCGCGTAATCTGATGACGGTAGGCGAAATGTCCTCTACCACGCTGGAAAACTGCCAGCAATATGCCGCGCTTAGCGG CGACGAACTCTCAATGACCTTCAATTTTCATCATCTGAAGGTGGATTACCCCAATGGCGAAAAGTGGACGCTGGCAAAAC CTGATTATGTGGCGCTGAAAGCGTTGTTCCGCCACTGGCAACAGGGGATGCATAACGTCGCCTGGAACGCGTTATTCTGG TGTAATCACGATCAGCCGCGCATCGTTTCCCGCTTTGGCGACGAGGGGGAATACCGGGTTCCAGCCGCGAAAATGCTGGC GATGGCGCTGCACGGTATGCAAGGGACGCCTTATATCTATCAGGGCGAAGAAATCGGCATGACCAACCCACACTTTACCC GCATCACCGATTATCGCGACGTGGAAAGTCATAATATGTTTGCCGCGCTACGCGCCGCCGGACGCGACCCCGACGAACTA CTGGCTATCCTGGCCAGTAAATCCCGCGACAACAGCCGCACGCCGATGCAGTGGGACAACGGTAAAAACGCCGGTTTCAC CCAGGGCGAGCCGTGGATAAGCCTGTGCGATAATTATACGGAGGTTAATGTCGCGGCGGCATTACGCGATGAAAACTCGG TGTTTTACACCTATCAAAAGCTGATTGCGCTACGTAAAACCCAGCCTGTATTGATCTGGGGCGATTATCAGGATCTCCTC CCGGATAGCCCATCAGTATGGTGTTATCGCCGCCAGTGGCAGGGGCAAATCCTGCTGGTTGTCGCCAATCTGAGTAACCA GTGCCAGGAGTGGCATCCACCGCATATCAAAGGACAGTGGCAGGCGCTACTGCATAATTATGGCGAGGTCGCCAGCCAGC CAGCTGCGATGACGCTGCGCCCATTTGAAGCCATCTGGTGGTTACAACGCTAA Protein sequence : MTIPLWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQRLGVDAIWLTPFYISPQVDNGYDVANYTAIDPTYGTLD DFDELVAQAKARGIRIILDMVFNHTSTQHTWFREALNKESPYRQFYIWRDGTPDVCPNNWQSKFGGSAWRWHSQSEQYYL HLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLIAKDQDFPDDPTGDGRRFYTDGPRAHTFLREMNRDVF TPRNLMTVGEMSSTTLENCQQYAALSGDELSMTFNFHHLKVDYPNGEKWTLAKPDYVALKALFRHWQQGMHNVAWNALFW CNHDQPRIVSRFGDEGEYRVPAAKMLAMALHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESHNMFAALRAAGRDPDEL LAILASKSRDNSRTPMQWDNGKNAGFTQGEPWISLCDNYTEVNVAAALRDENSVFYTYQKLIALRKTQPVLIWGDYQDLL PDSPSVWCYRRQWQGQILLVVANLSNQCQEWHPPHIKGQWQALLHNYGEVASQPAAMTLRPFEAIWWLQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 8e-124 | 44 |
