Gene Information

Name : xylA (SPA3512)
Accession : YP_152629.1
Strain : Salmonella enterica ATCC 9150
Genome accession: NC_006511
Putative virulence/resistance : Unknown
Product : D-xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 3634418 - 3635695 bp
Length : 1278 bp
Strand : -
Note : similar to Salmonella typhi CT18 D-xylose isomerase

DNA sequence :
ATGCAGGCTTATTTTGACCAACTCGATCGTGTTCGCTATGAAGGCCCTCAATCGACTAACCCGCTGGCATTTCGTCATTA
CAATCCCGACGAGCTGGTTTTAGGTAAACGTATGGAAGATCACCTGCGTTTCGCGGCCTGTTACTGGCATACCTTCTGCT
GGAACGGCGCGGATATGTTTGGTGTAGGCGCGTTTAATCGTCCGTGGCAGCAACCGGGCGAAGCGCTGGAGCTGGCGAAA
CGCAAAGCGGACGTGGCGTTTGAATTTTTCCACAAACTGAATGTGCCTTTTTACTGCTTCCATGACGTGGATGTGTCGCC
GGAAGGCGCGTCGTTGAAAGAGTATAAAAACAACTTCGCGCAGATGGTGGATGTGCTGGCGGCGAAACAGGAGCAGAGCG
GCGTAAAACTGCTGTGGGGAACGGCGAACTGCTTTACCAACCCGCGCTATGGCGCAGGCGCCGCCACTAACCCGGACCCG
GAAGTCTTTAGCTGTGCAGCGACGCAAGTGGTTACGGCAATGAACGCCACGCATAAACTGGGCGGCGAAAATTACGTCCT
GTGGGGCGGACGCGAAGGTTATGAAACGTTGCTGAATACCGATCTACGCCAGGAACGCGAACAGATTGGCCGCTTTATGC
AAATGGTGGTTGAGCACAAACATAAAATGGGTTTCCAGGGCACGCTGCTGATTGAACCGAAACCGCAGGAACCGACAAAA
CATCAGTATGATTATGACGTTGCAACGGTCTATGGCTTCCTCAAACAGTTCGGCCTGGAAAAAGAGATCAAAGTGAACAT
TGAGGCGAACCACGCCACGCTGGCGGGCCATTCGTTCCACCATGAAATCGCAACCGCTATCGCGCTGGGTATTTTTGGCT
CCGTTGACGCCAACCGCGGCGATGCGCAACTGGGCTGGGATACCGATCAGTTCCCGATTAGCGTTGAAGAGAACGCGCTG
GTGATGTACGAAATCCTGAAAGCGGGCGGATTCACGACGGGCGGTCTCAACTTCGACGCCAAAGTTCGTCGCCAGAGCAC
CGATAAATACGATCTGTTCTACGGTCATATCGGCGCGATGGATACGATGGCGTTGTCACTGAAAATCGCCGCGCGTATGG
TCGAAGACGGCGAGCTGGGGCAGCAGATTCTGAAAGGACAACTCTCCTTAGGCAAACTGGCGCAGTATGCGGAGCAGCAC
CATCTGGCGCCGGTACATCAAAGCGGTCATCAGGAGCTGTTAGAAAATCTGGTTAACCGTTATCTGTTTGATAAATAA

Protein sequence :
MQAYFDQLDRVRYEGPQSTNPLAFRHYNPDELVLGKRMEDHLRFAACYWHTFCWNGADMFGVGAFNRPWQQPGEALELAK
RKADVAFEFFHKLNVPFYCFHDVDVSPEGASLKEYKNNFAQMVDVLAAKQEQSGVKLLWGTANCFTNPRYGAGAATNPDP
EVFSCAATQVVTAMNATHKLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKMGFQGTLLIEPKPQEPTK
HQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENAL
VMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELGQQILKGQLSLGKLAQYAEQH
HLAPVHQSGHQELLENLVNRYLFDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 3e-101 47
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 2e-101 47