Gene Information

Name : cadB (SPA0308)
Accession : YP_149640.1
Strain : Salmonella enterica ATCC 9150
Genome accession: NC_006511
Putative virulence/resistance : Virulence
Product : cadaverine/lysine antiporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 346798 - 348129 bp
Length : 1332 bp
Strand : -
Note : similar to Salmonella typhi CT18 probable cadaverine/lysine antiporter

DNA sequence :
ATGAGTTCTGTCAAAAAGATCGGGCTATTTGCCTGTACTGGCGTCGTTGCCGGTAATATGATGGGGAGCGGGATTGCATT
ATTACCCGCCAACCTTGCCAGTATTGGTGGCATTGCCATCTGGGGCTGGGTAATTTCTATTATTGGGGCAATGTCGCTGG
CTTATGTTTATGCGAGGCTGGCAACCAAAAACCCGCAACAGGGTGGCCCTATCGCTTATGCTGGGGAAATATCTCCGGCG
TTTGGTTTCCAGACCGGCGTTCTTTATTATCACGCAAACTGGATTGGTAACTTAGCCATCGGTATTACCGCGGTTTCTTA
TCTTTCTACGTTCTTCCCGGCATTAAATAATCCAATACCGGCAGGTATTGCCTGTATTGCTATCGTCTGGCTGTTCACCT
TTATTAATATGCTGGGCGGGGCCTGGGTCAGCCGCTTGACAACGATTGGCCTGTTTCTGGTGCTGATCCCGGTAGTCTTG
ACCGCAGTCGCCGGCTGGCATTGGTTCGATATCGCGACCTATCACGCGAACTGGAACACGTCTACGACGACCGACTCTCA
CGCCATTGTTAAAAGTATTCTGCTCTGCCTGTGGGCGTTCGTTGGCGTTGAGTCTGCCGCCGTCAGCACCGGCATGGTGA
AAAACCCGAAACGCACCGTACCGCTGGCAACCATGCTGGGTACCGCGCTGGCAGGCATCATCTATATCGCCGCGACTCAG
GTTATCGCCGGGATGTTCCCAGCTTCCGTTATGGCCTCTTCCGGCGCGCCGTTCGCTATCAGTACCTCCACGATTCTGGG
TGGCTGGGCTGCGCCGCTGGTTTCCGCCTTTACCGCTTTCGCCTGCCTGACGTCTCTGGGCTCCTGGATGATGCTGGTCG
GCCAGGCTGGGGTTCGCGCCGCCAACGACGGCAACTTCCCGAAAATTTACGGTGAAATGGATAAAAACGGTATTCCGAAA
AAAGGTCTGCTGTTGGCTGCGGTGAAAATGACGGCGCTGATGATTCTGATCACCATCATGAACTCCAGCGGCGGTAAAGC
GTCCGACCTGTTCGGCGAACTGACCGGGATTGCCGTACTGCTTACCATGCTGCCGTACTTCTACTCTTGTGTTGACCTGA
TTCGTTTCGAAGGGTTCAACATCCGTAACTCGGTAAGCCTGATTTGTTCTGTACTGGGCTGCGCATTTTGCTTCATCGCA
CTGATGGGCGCCAGCTCCTTCGAACTCTCCGGCACCTTTATCGTCAGTCTGATCATCCTGATGTTCTACGGTCGCAAAAT
GCACCAGCGCCAGAACAACGACAGCGACAACAATACGGCTGAAGCGCTTTAA

Protein sequence :
MSSVKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWVISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPA
FGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPALNNPIPAGIACIAIVWLFTFINMLGGAWVSRLTTIGLFLVLIPVVL
TAVAGWHWFDIATYHANWNTSTTTDSHAIVKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTALAGIIYIAATQ
VIAGMFPASVMASSGAPFAISTSTILGGWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKIYGEMDKNGIPK
KGLLLAAVKMTALMILITIMNSSGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGFNIRNSVSLICSVLGCAFCFIA
LMGASSFELSGTFIVSLIILMFYGRKMHQRQNNDSDNNTAEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 0.0 90
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 0.0 90
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 6e-144 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadB YP_149640.1 cadaverine/lysine antiporter VFG1671 Protein 4e-144 68