|
Name : xerD (SPA2912) Accession : YP_152065.1 Strain : Salmonella enterica ATCC 9150 Genome accession: NC_006511 Putative virulence/resistance : Unknown Product : site-specific integrase/recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 3022045 - 3022941 bp Length : 897 bp Strand : - Note : similar to Salmonella typhi CT18 site-specific integrase/recombinase DNA sequence : ATGGAACAGGATTTAGCGCGTATTGAGCAGTTTCTGGATGCCCTGTGGCTGGAACGAGATCTGGCGGAAAATACATTAAG CGCGTATCGTCGCGATTTATCGATGGTCGTTGCGTGGTTGCATCATCGCGGAAAAACGCTTGCGACGGCGCAGGCTGATG ATTTACAAACGCTGCTGGCTGAACGGGTGGAGGGCGGATACAAAGCGACCAGCTCCGCACGCCTGTTAAGCGCTATGCGG CGCTTCTTCCAGCATCTGTACCGTGAAAAGTATCGTGAGGATGATCCGAGCGCGCAGTTGGCCTCGCCTAAGCTTCCGCA GCGTTTACCGAAAGATCTTAGCGAGGTGCAGGTTGAGCGGCTCTTGCAGGCGCCGCTTATTGATCAACCTTTGGAGTTGC GCGATAAAGCTATGTTGGAAGTGCTGTATGCCACCGGTTTGCGCGTGTCGGAACTGGTGGGGCTGACAATGAGCGATATC AGTCTGCGGCAGGGCGTGGTGCGGGTTATCGGTAAAGGCAATAAAGAGCGGTTGGTGCCGTTAGGCGAAGAGGCGGTATA TTGGCTGGAAACGTATCTGGAGCATGGGCGTCCCTGGTTACTCAATGGCGTATCGATTGACGTATTGTTCCCCAGCCAGC GTGCGCAGCAGATGACGCGGCAGACCTTCTGGCACCGTATTAAACATTATGCGGTACTGGCTGGAATCGATAGCGAAAAA CTATCGCCGCATGTTTTACGTCACGCTTTCGCCACGCATTTGCTGAATCACGGCGCCGACTTGCGCGTTGTACAAATGCT ACTTGGGCATAGCGATCTTTCGACGACACAAATTTATACGCATGTCGCAACGGAGCGTTTGCGTCAACTTCATCAACAGC ACCATCCGCGGGCATGA Protein sequence : MEQDLARIEQFLDALWLERDLAENTLSAYRRDLSMVVAWLHHRGKTLATAQADDLQTLLAERVEGGYKATSSARLLSAMR RFFQHLYREKYREDDPSAQLASPKLPQRLPKDLSEVQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 1e-61 | 54 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 1e-61 | 54 |
