Gene Information

Name : spaN (SPA2750)
Accession : YP_151919.1
Strain : Salmonella enterica ATCC 9150
Genome accession: NC_006511
Putative virulence/resistance : Virulence
Product : antigen presentation protein SpaN
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2849782 - 2850792 bp
Length : 1011 bp
Strand : -
Note : similar to Salmonella typhi Ty2 antigen presentation protein SpaN

DNA sequence :
ATGGGCGATGTGTCAGCTGTCAGTTCATCCGGGAACATTTTACTGCCGCAGCAGGATGAGGTTGGCGGTTTATCAGAAGC
ATTAAAAAAAGCGGTGGAAAAACATAAGACAGAATATTCCGGTGATAAAAAAGATCGCGACTATGGCGATGCTTTCGTAA
TGCATAAAGAAACGGCTTTACCGGTATTACTGGCGGCATGGCGACATGGCGCGCCAGCGAAATCAGAACATCACAATGGC
AACGTTTCTGGTCTGCATCATAACGGAAAAGGCGAACTCAGGATTGCTGAAAAACTGTTGAAAGTCACTGCTGAAAAATC
TGTCGGTTTGATTTCTGCGGAGGCCAAAGTAGATAAATCCGCAGCGTTGCTATCGCCTAAAAATAGGCCGTTAGAAAGCG
TAAGCGGTAAAAAATTATCTGCTGATTTAAAAGCCGTGGAATCCGTTAGTGAAGTAACCGATAACGCCACGGGAATCTCT
GACGATAATATCAAGGCATTGCCTGGGGATAATAAAGCCATCGCGGGCGAAGGCGTTCGTAAAGAGGGCGCGCCGCTGGC
GCGGGATGTCGCACCTGCCCGAATGGCCGCAGCCAATACCGGTAAGCCTGACGATAAAGATCATAAAAAGGTTAAAGATG
TTTCTCAGCTTCCGCTGCAACCAACCACTATCGCCGATCTTAGCCAATTAACCGGCGGCGATGAAAAAATGCCTTTAGCG
GCGCAATCAAAGCCGATGATGACTATTTTTCCCACTGCCGATGGCGTGAAAGGAGAGGATAGCTCGCTGACTTACCGTTT
TCAGCGCTGGGGAAATGACTATTCCGTCAATATTCAGGCGCGGCAAGCAGGGGAGTTTTCGTTAATACCGTCAAATACGC
AGGTTGAACATCGTTTGCATGATCAATGGCAAAACGGTAATCCCCAGCGCTGGCACCTGACGCGAGACGATCAACAAAAT
CCGCAGCAGCAACAGCACAGACAGCAATCTGGCGAGGAGGATGACGCCTAA

Protein sequence :
MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETALPVLLAAWRHGAPAKSEHHNG
NVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKSAALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGIS
DDNIKALPGDNKAIAGEGVRKEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQN
PQQQQHRQQSGEEDDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invJ NP_461813.1 needle length control protein Virulence SPI-1 Protein 1e-133 99
spaN NP_457286.1 surface presentation of antigens protein (associated with type III secretion and virulence) Virulence SPI-1 Protein 1e-133 99
spaN NP_806495.1 antigen presentation protein SpaN Virulence SPI-1 Protein 1e-133 99
invJ YP_217811.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 6e-134 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaN YP_151919.1 antigen presentation protein SpaN VFG0553 Protein 5e-134 99