Gene Information

Name : SPA2583 (SPA2583)
Accession : YP_151762.1
Strain : Salmonella enterica ATCC 9150
Genome accession: NC_006511
Putative virulence/resistance : Unknown
Product : capsid portal protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 2683202 - 2684245 bp
Length : 1044 bp
Strand : +
Note : similar to Salmonella typhi CT18 probable capsid portal protein

DNA sequence :
ATGAGTGAACACGACGCCCTGACCAGCACCGCGCCAGTGCAGGAGGCCGAACAGCAGAAGAATACAACTCACGCCGAAGC
GTTCAGCTTTGGCGATCCGATCCCGGTACTGGACCGCCGCGAACTGCTGGACTATGTGGAATGCGTACAGATGGACAGAT
GGTATGAGCCGCCAGTAAGCTTTGACGGGCTGGCGCGAACCTACCGCGCCGCTGTGCATCACAGCTCACCGATAGCGGTT
AAGCGTGACATTCTCAGCAGTACGTACATCCCGCACCGCCTGCTCAGCCAGCAGGCTTTTGCCCGTTTCGTCCAAGATTA
TCTGGTGTTCGGTAACGCCTATCTGGAAAAGCGCACCAACCGGCTCGGCGGCGTTCTCTCACTGGAGCCAGCACTGGCGA
AGTACACACGCCGTGGCTTGGACCTCGACACCTACTGGTTTGTGCAGTACGACCTGACCACGCAGCCCTATGAATTTACA
CAGGGCAACATCTTTCACTTTATGGAGCCGGATATTAACCAAGAGATTTACGGGCTGCCCGGCTATCTCTCCGCCATTCC
GTCAACCCTGCTCAACGAGTCCGCAACGCTGTTCCGCCGGAAGTATTACATCAACGGCAGCCATGCGGGGTTCATCATGT
ATATGACCGATGCAGCACAGAATCAGGAGGACGTGAACAATATCCGCCAGGCAATGAAAAGCGCCAAAGGGCCGGGCAAC
TTCCGCAACCTGTTTATGTACTCGCCCAATGGTAAAAAGGACGGCATCCAGATCATCCCGTTGTCGGAAGTTGCGGCAAA
GGATGAGTTTCTTAACATCAAGAACGTTAGCCGCGATGACATGATGGCAGCGCACCGCGTGCCACCGCAGATGATGGGCA
TCATCCCCAACAATACCGGCGGCTTTGGTGATGTGGAAAAGGCCAGCCGCGTGTTTGTACGAAATGAATTAATACACCTT
CAAGAAAGGATTAAAGAACTCAATGAATGGTTAGGGGATGAAGTCATTAGATTTGCGAAATATACACTCGACGACATAAG
CTAA

Protein sequence :
MSEHDALTSTAPVQEAEQQKNTTHAEAFSFGDPIPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTYRAAVHHSSPIAV
KRDILSSTYIPHRLLSQQAFARFVQDYLVFGNAYLEKRTNRLGGVLSLEPALAKYTRRGLDLDTYWFVQYDLTTQPYEFT
QGNIFHFMEPDINQEIYGLPGYLSAIPSTLLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNIRQAMKSAKGPGN
FRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIIPNNTGGFGDVEKASRVFVRNELIHL
QERIKELNEWLGDEVIRFAKYTLDDIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 7e-163 99
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 7e-163 99
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 3e-90 55