|
Name : SPA2580 (SPA2580) Accession : YP_151759.1 Strain : Salmonella enterica ATCC 9150 Genome accession: NC_006511 Putative virulence/resistance : Unknown Product : major capsid protein Function : - COG functional category : - COG ID : - EC number : - Position : 2679379 - 2680443 bp Length : 1065 bp Strand : - Note : similar to Salmonella typhi CT18 putative major capsid protein DNA sequence : ATGAAAAAGAAAACCCGCTTTGCCTTTAACGCTTACCTGCAGCAGCTGGCGCGCCTGAATGGTGTGGATGTTGAAGAACT CTCCAGCAAGTTCACCGTGGAGCCGTCCGTGCAGCAGACTCTGGAAGACCACATCCAGCAGTCTGCTGCTTTCCTGACGC TGATTAACATCACGCCGGTCACTGAGCAGTCCGGTCAGTTGCTGGGGCTGGGCGTTGGCAGCACCATTGCCGGAACCACC GATACCACCACCAAAGAGCGCGAGCCTACCGATCCGACGCTGATGGAAGACGTGGAATACAAATGCGAGCAGACCAACTT TGATACGGTGCTGACCTACGCAAAACTGGACCTGTGGGCGAAATTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCG TCAAGCGTCAGGCGCTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCCAACCGTGCTGAAAAC CCGCTGCTGCAGGACGTCAATAAAGGCTGGCTGCAGAAAATCCGCGAAGACGCGCCGGATCACGTCATGGGCAGCAAAAC CGCAGAAGACGGCACCACTACTGCAGAACCAGTAAAAGTAGGTCCGGGTGGTAAGTATGTAAATCTTGACGCGGTGGTGA TGGATACCGTCAACGAGCTGATCGATGTGGAGTATCAGGATGATGACGAGCTGGTTGTTGTCTGCGGACGTGAACTGCTG TCTGACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGACAACAGCGAGAAAATCGCCGCCGATCTGATCATCAGCCAGAA ACGCATGGGCGGCCTGCAGGCTGTGCGCGCGCCTTTCTTCCCGGCAAATGCCCTGCTGATCACCCGTCTGGATAACCTGT CCATCTACTGGCAGGAAGACACCCGCCGCCGTTCAGTTATCGACAACCCGAAACGCGACCGGATTGAAAACTTTGAATCC GTCAACGAGGCGTATGTGGTCGAGGACTACCGCTGCGCGGCGCTGGTAGAAAACATCGAAATCGGTGATTTCAGCGCGCC TGCCGCACCGGAAAGTGGGGAATAA Protein sequence : MKKKTRFAFNAYLQQLARLNGVDVEELSSKFTVEPSVQQTLEDHIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTT DTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN PLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDTVNELIDVEYQDDDELVVVCGRELL SDKYFPLVNKEQDNSEKIAADLIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES VNEAYVVEDYRCAALVENIEIGDFSAPAAPESGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 7e-148 | 100 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 7e-148 | 100 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 2e-71 | 52 |
