Gene Information

Name : safB (SPA2463)
Accession : YP_151653.1
Strain : Salmonella enterica ATCC 9150
Genome accession: NC_006511
Putative virulence/resistance : Virulence
Product : periplasmic fimbrial chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2562231 - 2562971 bp
Length : 741 bp
Strand : -
Note : similar to Salmonella typhi CT18 periplasmic fimbrial chaperone protein

DNA sequence :
ATGAAAATTATTAGTTTTGGTGTAATGGCGGCTGTTTTATTCGTCTCTAATTCTATAACTCCTCCAGTGTATGCCACTGA
GCAGAAATTAAGTTTAAACACTAAATCATTCAGCGTGAAGCTGGGGGCTACACGGGTGATTTATCACGCTGGTACAGCTG
GAGCCACGCTCTCGGTGAGCAACCCGCAGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCG
CCTGCTCCCTTTTTGGTGATGCCGCCTCTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGG
TGGTGACATGCCAACGGATCGTGAGACTTTACAGTGGGTCTGTGTAAAGGCGGTACCACCCGAAAATGAATCGTCGGATA
CACAGGCTAAGGGCGCGACCCTTGACCTCAATTTGTCCATTAACGTCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTG
AAGGGGACGCCGGAAGATGTTGCAGGAAATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTGGAGAACCCCACCCC
GTTTTACATGAATTTAGCCTCCGTCACAGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATATCCCCCCTTTTGCTGACA
AAACACTAAATATGCCAGGTAGTGCCCATGGTGATATCGAGTGGAGCGTTATTACAGACTTTGGTGGTGAAAGTCATCCG
TTCCACTACGTCCTTAAATAA

Protein sequence :
MKIISFGVMAAVLFVSNSITPPVYATEQKLSLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSS
PAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCVKAVPPENESSDTQAKGATLDLNLSINVCDKLIFRPDAV
KGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGSAHGDIEWSVITDFGGESHP
FHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 1e-112 98
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 2e-55 46
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 2e-55 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
safB YP_151653.1 periplasmic fimbrial chaperone protein VFG0943 Protein 3e-52 52
safB YP_151653.1 periplasmic fimbrial chaperone protein VFG0850 Protein 5e-55 50
safB YP_151653.1 periplasmic fimbrial chaperone protein VFG0858 Protein 5e-52 50
safB YP_151653.1 periplasmic fimbrial chaperone protein VFG0852 Protein 2e-53 49