Gene Information

Name : fepD (SPA2142)
Accession : YP_151346.1
Strain : Salmonella enterica ATCC 9150
Genome accession: NC_006511
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport protein FepD
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2228920 - 2229927 bp
Length : 1008 bp
Strand : +
Note : similar to Salmonella typhi CT18 ferric enterobactin transport protein FepD

DNA sequence :
ATGTCATGCTCGTTTTCCGTGACGCGCGCGTTTGCCGTGCCCGGATTGTTGTTATTACTGAGTCTCGCCGCGGTTTTAAG
CCTGGTCATTGGCGCGAAACCGCTGCCCGCCGCCGTCGTGCTGGAGGCGTTCACCGGCGTGTGCCAAAGCGCCGATTGCA
CCATCGTCCTGGATGCGCGTTTGCCGCGTACGCTGGCCGGATTACTGGCAGGCGGCGCGTTGGGTCTCGCCGGGGCGCTC
ATGCAAACACTCACTCGCAACCCGCTCGCCGACCCGGGGATTCTGGGCGTTAACAACGGCGCCAGCTTCGCCATTGTACT
GGGCGCGGCGCTGTTTGGTTTCTCCACGCCGCTGGAACAGCTTTTCATGGCATTTAGCGGCGCGCTTATCGCATCGCTGA
TTGTCGCCTTCACCGGTAGTCAGGGCGGCGGCCAGTTAAGCCCGGTTCGCCTGACACTGGCGGGCGTGGCGCTTGGCGCG
GTACTGGAAGGATTGACCAGCGGCATCGCGCTGTTAAATCCAGAGGTCTATGACCAGCTTCGCTTCTGGCAGGCGGGATC
GCTGGATATTCGCAGCCTGCAAACGTTGAAAGTCGCGCTCGCGCCCGTGGTTATCGCTGGGATCGTGGCGCTATTTCTGA
GCCGTGCGCTGAACAGCCTGAGCCTCGGCAGCGATACCGCGACGGCGCTGGGGAGTAAAGTGGCGCGCACCCAACTTATC
GGTTTACTGGCGATTACCGTCTTGTGCGGCAGCGCAACGGCGCTGGTCGGCCCTATCGCCTTTATTGGTCTGATGATGCC
GCATATGGCGCGTTGGCTGGTGGGCGCAGACCACCGCTGGTCGCTGCCAGTGACGCTACTGGCAACCCCTGCTCTGCTGC
TTTTTGCCGATATTATTGGTCGTCTGTTGGTGCCGGGCGAACTCCGCGTATCGGTCGTCAGTGCGTTTATCGGCGCGCCG
GTACTTATTTTTCTGGTACGCCGTAAATCGAACGGAGGCGGCCTGTGA

Protein sequence :
MSCSFSVTRAFAVPGLLLLLSLAAVLSLVIGAKPLPAAVVLEAFTGVCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGILGVNNGASFAIVLGAALFGFSTPLEQLFMAFSGALIASLIVAFTGSQGGGQLSPVRLTLAGVALGA
VLEGLTSGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVALAPVVIAGIVALFLSRALNSLSLGSDTATALGSKVARTQLI
GLLAITVLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLLVPGELRVSVVSAFIGAP
VLIFLVRRKSNGGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-32 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-32 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-32 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_151346.1 ferric enterobactin transport protein FepD VFG0926 Protein 7e-102 89