Gene Information

Name : pagC (SPA1599)
Accession : YP_150838.1
Strain : Salmonella enterica ATCC 9150
Genome accession: NC_006511
Putative virulence/resistance : Virulence
Product : outer membrane invasion protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3637
EC number : -
Position : 1663843 - 1664400 bp
Length : 558 bp
Strand : -
Note : similar to Salmonella typhi CT18 outer membrane invasion protein

DNA sequence : 
ATGAAAAATATTATTTTATCCACTTTAGTTATTACTACAAGCGTTTTGGTTGTAAATGTTGCACAGGCCGATACTAACGC
CTTTTCCGTGGGGTATGCACAAAGTAAAGTTCAGGATTTCAAAAATATCCGAGGGGTAAATGTGAAATACCGTTATGAGG
ATGACTCTCCGGTAAGTTTTATTTCCTCGCTAAGTTACTTATATGGAGACAGCCAGGCTTCCGGGTCTATTGAGTCTGAA
GGTATCCATTACCATGACAAGTTTGAGGTGAAATATGGTTCTTTAATGGTTGGGCCAGCCTATCGATTGTCTGACAATTT
TTCGTTATACGCGCTGGCAGGTGTCGGCACGGTAAAGGCGACATTTAAAGAACATGCCACTCAGGATGGCGATTCTTTTT
CTAACAAAATTTCCTCAAGGAAAACGGGATTTGCCTGGGGCGCGGGTGTACAGATGAATCCGCTGGAGAATATCGTCGTC
GATGTTGGGTATGAAGGAAGCAACATCTCCTCTACAAAAATAAACGGCTTCAACGTCGGAGTTGGATACCGTTTCTGA

Protein sequence : 
MKNIILSTLVITTSVLVVNVAQADTNAFSVGYAQSKVQDFKNIRGVNVKYRYEDDSPVSFISSLSYLYGDSQASGSIESE
GIHYHDKFEVKYGSLMVGPAYRLSDNFSLYALAGVGTVKATFKEHATQDGDSFSNKISSRKTGFAWGAGVQMNPLENIVV
DVGYEGSNISSTKINGFNVGVGYRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 9e-71 98
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 4e-27 47
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 2e-27 47
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 1e-26 46
pagC AGI37340.1 PagC Virulence OI-122 Protein 5e-19 43
pagC AGI37347.1 PagC Virulence OI-122 Protein 5e-19 43
pagC AGI37348.1 PagC Virulence OI-122 Protein 1e-19 43
pagC AGI37351.1 PagC Virulence OI-122 Protein 1e-19 43
pagC AGI37341.1 PagC Virulence OI-122 Protein 2e-18 42
pagC AGI37349.1 PagC Virulence OI-122 Protein 2e-18 42
pagC AGI37352.1 PagC Virulence OI-122 Protein 2e-18 42
pagC AGI37337.1 PagC Virulence OI-122 Protein 7e-19 42
pagC AGI37342.1 PagC Virulence OI-122 Protein 7e-19 42
pagC AGI37344.1 PagC Virulence OI-122 Protein 7e-19 42
pagC AGI37346.1 PagC Virulence OI-122 Protein 7e-19 42
pagC AGI37350.1 PagC Virulence OI-122 Protein 7e-19 42
pagC AGI37343.1 PagC Virulence OI-122 Protein 3e-18 41
pagC AGI37353.1 PagC Virulence OI-122 Protein 3e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pagC YP_150838.1 outer membrane invasion protein VFG0442 Protein 5e-37 54