Gene Information

Name : GK0908 (GK0908)
Accession : YP_146761.1
Strain : Geobacillus kaustophilus HTA426
Genome accession: NC_006510
Putative virulence/resistance : Resistance
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 932124 - 932798 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence :
ATGACACGAATTTTAATCGTCGATGATGACGCGCATATCCGCGAACTCGTCAGCCACTTTTTAAACTTAGAAGGATTTAC
AATCCATGAGGCGGCTAACGGAAAAGAAGCACTTGACGTATTGGAAACAGTGAAAGTGGATTTGGTCATTATGGATATTA
TGATGCCGGAAATGGATGGTTGGGAGCTATGTCGCGAACTGCGCGACTACGACGATGTCCCCATTTTAATGTTGACGGCC
AAAGGGGAAACAAGACAGAAGGTGAAAGGATTCGAGCTCGGGGCGGACGATTATCTTGTCAAACCGTTCGACCCACTTGA
GCTCGTCGCCCGGGTCAAAGCATTGCTCAAACGGTATCGAATCGCTACATCGCAAATCGTACAAATAGGCCGTTTATCGT
TAAACCGCAAGACGTACGAATGCCGTTTGGGAGACCAAGAGATCTTCTTGCCGCCGAAAGAATTTGAACTGCTTTTTAAA
TTGGCCAGCTATCCGGGCAAAACGTTTACACGCGACGAGTTGATTGAACAGATCTGGGGCTACGATTATGATGGGGATGA
ACGAACAGTGGATGTGCATATCAAACGATTGCGCGAACGGTTTGCCCAACCAGATTCTCCATTTTCCATCCGCACGATTC
GCGGGCTCGGCTATCGGTTGGAGGCACAGTCATGA

Protein sequence :
MTRILIVDDDAHIRELVSHFLNLEGFTIHEAANGKEALDVLETVKVDLVIMDIMMPEMDGWELCRELRDYDDVPILMLTA
KGETRQKVKGFELGADDYLVKPFDPLELVARVKALLKRYRIATSQIVQIGRLSLNRKTYECRLGDQEIFLPPKEFELLFK
LASYPGKTFTRDELIEQIWGYDYDGDERTVDVHIKRLRERFAQPDSPFSIRTIRGLGYRLEAQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-37 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GK0908 YP_146761.1 two-component response regulator NC_012469.1.7685629. Protein 1e-41 46
GK0908 YP_146761.1 two-component response regulator NC_012469.1.7686381. Protein 2e-38 44
GK0908 YP_146761.1 two-component response regulator AE000516.2.gene3505. Protein 5e-38 44
GK0908 YP_146761.1 two-component response regulator HE999704.1.gene2815. Protein 4e-42 43
GK0908 YP_146761.1 two-component response regulator AF310956.2.orf0.gene Protein 8e-38 42
GK0908 YP_146761.1 two-component response regulator AM180355.1.gene1830. Protein 2e-38 42
GK0908 YP_146761.1 two-component response regulator NC_002952.2859905.p0 Protein 5e-40 42
GK0908 YP_146761.1 two-component response regulator NC_002951.3237708.p0 Protein 4e-40 42
GK0908 YP_146761.1 two-component response regulator NC_002758.1121668.p0 Protein 4e-40 42
GK0908 YP_146761.1 two-component response regulator NC_009641.5332272.p0 Protein 4e-40 42
GK0908 YP_146761.1 two-component response regulator NC_013450.8614421.p0 Protein 4e-40 42
GK0908 YP_146761.1 two-component response regulator NC_007622.3794472.p0 Protein 5e-40 42
GK0908 YP_146761.1 two-component response regulator NC_007793.3914279.p0 Protein 4e-40 42
GK0908 YP_146761.1 two-component response regulator NC_003923.1003749.p0 Protein 4e-40 42
GK0908 YP_146761.1 two-component response regulator NC_002745.1124361.p0 Protein 4e-40 42
GK0908 YP_146761.1 two-component response regulator NC_009782.5559369.p0 Protein 4e-40 42
GK0908 YP_146761.1 two-component response regulator U35369.1.gene1.p01 Protein 5e-36 41
GK0908 YP_146761.1 two-component response regulator AE016830.1.gene2255. Protein 5e-36 41