Gene Information

Name : GK3476 (GK3476)
Accession : YP_149329.1
Strain : Geobacillus kaustophilus HTA426
Genome accession: NC_006510
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 3522675 - 3524039 bp
Length : 1365 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
ATGAGCGAACTTTTTTCAGAACGAATTCCTCCGCAAAGCATTGAAGCCGAGCAGGCCGTGCTTGGCGCTGTGTTTTTGGA
TCCCACTGCGCTGACGCTCGCCTCGGAACGATTAATTCCCGAAGACTTCTACCGCGCGGCCCATCAAAAAATTTTCCACG
CCATGCTTCGCGTCGCTGATAAAGGCGAGCCGGTCGATTTAGTGACGGTGACGGCGGAACTGGCCGCTTTGGAGCAGCTG
GAGGAAGTGGGCGGTGTCTCCTACTTAAGCGAGCTTGCCGATTCTGTGCCGACAGCGGCCAACGTCGAATACTACGCCCG
CATTGTTGAAGAAAAATCATTGCTTCGCCGCCTCATTCGCACGGCGACATCGATTGCCCAAGATGGCTATACAAGGGAAG
ATGAAATTGACGTTTTGCTCGATGAAGCGGAACGGAAAATTATGGAGGTTTCCCAACGGAAACATTCAGGCGCCTTTAAA
AATATTAAAGATGTTCTCGTACAGACGTATGACAACATTGAAATGCTCCATAACCGGAACGGGGACATCACCGGCATCCC
GACCGGATTCACTGAACTCGACCGGATGACGTCCGGATTTCAGCGCAGCGACTTGATTATCGTCGCCGCCCGGCCATCGG
TCGGGAAGACGGCATTCGCATTAAACATCGCCCAAAATGTGGCGACGAAGACGAACGAAAATGTCGCGATTTTCAGCTTG
GAAATGAGCGCCCAGCAGCTTGTGATGCGGATGCTTTGCGCCGAAGGCAACATCAACGCCCAAAACTTGCGCACTGGCAA
GCTGACGCCGGAAGATTGGGGCAAGCTGACGATGGCGATGGGCAGTTTGTCAAACGCCGGCATTTATATTGACGATACGC
CGAGCATCCGCGTCAGCGACATTCGCGCCAAATGCCGCCGCTTGAAACAGGAAAGCGGCCTCGGCATGGTGGTGATCGAT
TATTTGCAGCTCATTCAAGGAAGTGGGCGCAACCGGGAAAACCGCCAGCAGGAAGTGTCGGAAATCTCCCGTTCGTTAAA
GGCGCTCGCCCGCGAGCTCGAAGTGCCGGTCATCGCTTTGTCACAGCTGTCGCGCAGCGTTGAGCAGCGCCAGGACAAGC
GGCCGATGATGTCCGATCTTCGCGAATCGGGGAGCATTGAGCAAGACGCTGATATCGTTGCCTTTTTGTATCGCGACGAC
TACTACAACAAAGATTCCGAGAACAAAAACATCATCGAAATCATTATCGCCAAACAGCGGAACGGCCCGGTCGGGACGGT
GCAGCTCGCCTTTATTAAAGAGTACAATAAATTCGTCAACTTAGAGCGCCGTTTCGATGAGGCGCAAATTCCACCGGGGG
CGTAA

Protein sequence :
MSELFSERIPPQSIEAEQAVLGAVFLDPTALTLASERLIPEDFYRAAHQKIFHAMLRVADKGEPVDLVTVTAELAALEQL
EEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIRTATSIAQDGYTREDEIDVLLDEAERKIMEVSQRKHSGAFK
NIKDVLVQTYDNIEMLHNRNGDITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSL
EMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMVVID
YLQLIQGSGRNRENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDLRESGSIEQDADIVAFLYRDD
YYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNLERRFDEAQIPPGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-80 43
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-69 43
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-69 42
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-69 42
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 5e-72 42
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-71 41
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-72 41
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 8e-73 41