Gene Information

Name : GK3326 (GK3326)
Accession : YP_149179.1
Strain : Geobacillus kaustophilus HTA426
Genome accession: NC_006510
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 3371797 - 3372504 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence : 
GTGAAACCATTGGCTCGTAAACCAGCAACATCGATCCGCAAAGCGGAGCGGAGACTGATCACGGTCGACAACCCAAAATC
GCCCATCGCGGAGCAATACCGAACGATCCGAACGAATATCCAATTTTCATTCATTGATGCGCCGCTCCGCTCCCTAATTG
TCACGTCAACCGGCCCTGGCGAGGGAAAATCGACCACCGCGGCGAACTTGGCTGTCGTCTTCGCTCAACAAGGGAAAAAG
ACATTGCTCATTGATGCCGACTTGCGCAAGCCGACCGTCCATTACACGTTCCGCTTAAACAACTACAAGGGATTGACCAA
CGTCTTGACGGGCTCGGCGCCGCTGTTGTCGACGTGTCAAGCGACCGAAATCGACCACTTATCAATCTTAACGTCTGGCC
CGATTCCGCCGAACCCTGCCGAGCTCCTCAGCTCGAACGCGATGGCGCAATGCCTCGAACAGTTGTATGAGACGTTTGAT
CTTGTCATCTTCGATACCCCGCCCGTCCTCGCCGTGACGGACGCACAAATTTTAGCCAACCAATGCGACGGCACGGTGCT
GGTCATCGAAAGCGGCGGCACCGAAATCGAAGCGGCGGTCAAGGCGAAAGAACTGCTCGAAGCGGCCAACGCCAAACTGC
TCGGCGTTGTCTTGAACAAGCGGAAGCACCGTGACGGCGGGTACTATTACTACTATCAATACAAGTAA

Protein sequence : 
MKPLARKPATSIRKAERRLITVDNPKSPIAEQYRTIRTNIQFSFIDAPLRSLIVTSTGPGEGKSTTAANLAVVFAQQGKK
TLLIDADLRKPTVHYTFRLNNYKGLTNVLTGSAPLLSTCQATEIDHLSILTSGPIPPNPAELLSSNAMAQCLEQLYETFD
LVIFDTPPVLAVTDAQILANQCDGTVLVIESGGTEIEAAVKAKELLEAANAKLLGVVLNKRKHRDGGYYYYYQYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 8e-23 46
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-35 45
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GK3326 YP_149179.1 capsular polysaccharide biosynthesis protein VFG1298 Protein 8e-35 45
GK3326 YP_149179.1 capsular polysaccharide biosynthesis protein VFG1349 Protein 2e-22 44
GK3326 YP_149179.1 capsular polysaccharide biosynthesis protein VFG1368 Protein 1e-21 42