Gene Information

Name : GK3319 (GK3319)
Accession : YP_149172.1
Strain : Geobacillus kaustophilus HTA426
Genome accession: NC_006510
Putative virulence/resistance : Virulence
Product : lipopolysaccharide synthesis sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 3365152 - 3365826 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
TTGGCGAAACCAGGCAGTACCGCAACTGTCGAAATCAAACGTCACCATCGAGTGGTCGTAAATGATAAAAAAGGATATTT
AATCGCCAAGCGAATCATGGATATATGCGGAGCGCTAATAGGACTTATTTGTTTATCGTGGCTATTTCTTATTGTCGCGC
TTCTCATTAAACTAGAAGATCCAAAAGGTCCCGTATTTTTTAAACAAGTCCGTGTTGGCAAAGATGGAAAAGAATTTTAT
ATGTATAAATTCCGCTCGATGGTGGCCAACGCGGAAGAATTGCTAGAATCGTTGCTTCATTTAAATGAAGTAAGTGGCGC
AATGTTTAAAATGAAAGATGACCCACGCATCACAAAAGTAGGAAAGTTCATCCGCAAAACAAGCATTGACGAACTTCCCC
AGCTATGGAATGTATTAAAAGGGGATATGAGTCTAGTTGGACCAAGACCGCCACTGCCAAGGGAAGTAGCACAGTATACG
GAATATGACAAGCAACGATTGCTTGTGACACCAGGATGTACGGGGCTTTGGCAAGTGAGTGGGAGAAATGATTTAGGATT
TGATGAAATGGTTGAGTTAGATTTGAAATATATTCGTGAAAGATCACTGTTATATGATATAAAGATTATATTTAAAACAA
TTAAAATAATGATTAGACCGAATAGTGCTTATTAA

Protein sequence : 
MAKPGSTATVEIKRHHRVVVNDKKGYLIAKRIMDICGALIGLICLSWLFLIVALLIKLEDPKGPVFFKQVRVGKDGKEFY
MYKFRSMVANAEELLESLLHLNEVSGAMFKMKDDPRITKVGKFIRKTSIDELPQLWNVLKGDMSLVGPRPPLPREVAQYT
EYDKQRLLVTPGCTGLWQVSGRNDLGFDEMVELDLKYIRERSLLYDIKIIFKTIKIMIRPNSAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-21 42
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GK3319 YP_149172.1 lipopolysaccharide synthesis sugar transferase VFG1309 Protein 8e-24 44
GK3319 YP_149172.1 lipopolysaccharide synthesis sugar transferase VFG1369 Protein 1e-16 43