Gene Information

Name : rph (GK2666)
Accession : YP_148519.2
Strain : Geobacillus kaustophilus HTA426
Genome accession: NC_006510
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2687130 - 2687900 bp
Length : 771 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAGAGCGGACGGACGAAGCAGTTGCGAGCTGCGCCCTGTACATATACACCCGCATTACATGAAGCACGCTGAAGGGTC
GGTGCTCATTGAAGTCGGCGACACGAAAGTCATTTGCACGGCGACGGTCGAAGAGAAAGTGCCGTCGTTTATGCGCGGCG
GCGGCAAAGGATGGATTACGGCCGAATATGGGATGCTGCCGCGGGCGACAGAGCAGCGGAATGTGAGGGAAGCGAGCAAA
GGAAAAGTGTCGGGGCGGACGATGGAAATTCAGCGCTTAATCGGCCGTGCGCTTCGCTCGGTTGTTGATCTTGAACAGCT
TGGTGAGCGGACCATTTGGATCGATTGCGACGTCATTCAGGCGGATGGCGGAACGCGGACGGCGTCGATCACCGGTGCGT
ATGTGGCGCTTGTGTTGGCGCTTGCCAAACTGGTGGAAGAAGGGAGGCTCGAGGCGCTTCCGATCCGCGATTTTCTCGCC
GCTACCTCGGTCGGCATCGATCCGGAGCATGGGGTGATTCTTGATTTAGATTACAACGAGGATGCGCGGGCGAAAGTGGA
TATGAACGTCGTCATGACCGGAGCCGGTCAATTTGTTGAGATTCAAGGGACCGGAGAGGAAGCGGTTTTTTCACGCGCCG
AGCTCGATGAATTGCTTGAAGCGGCGCAAATAGGCATCGAGCAGCTCATCGCCGTTCAGCGCCGCGCATTGGGCGAGTGG
GCGGCGCGCATCGGCGAAAAAAAAGAAGCGGCAGAGGAGGACACAGAGTGA

Protein sequence :
MRADGRSSCELRPVHIHPHYMKHAEGSVLIEVGDTKVICTATVEEKVPSFMRGGGKGWITAEYGMLPRATEQRNVREASK
GKVSGRTMEIQRLIGRALRSVVDLEQLGERTIWIDCDVIQADGGTRTASITGAYVALVLALAKLVEEGRLEALPIRDFLA
ATSVGIDPEHGVILDLDYNEDARAKVDMNVVMTGAGQFVEIQGTGEEAVFSRAELDELLEAAQIGIEQLIAVQRRALGEW
AARIGEKKEAAEEDTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 9e-57 61