Gene Information

Name : GK2629 (GK2629)
Accession : YP_148482.1
Strain : Geobacillus kaustophilus HTA426
Genome accession: NC_006510
Putative virulence/resistance : Virulence
Product : ATPase involved in pili biogenesis
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 2640086 - 2641750 bp
Length : 1665 bp
Strand : -
Note : -

DNA sequence :
ATGAACAAAAAACGTGAGCGGAAACGCCTCGGTGATTTGTTGGTGGAAGCGGGGCTGATTACGGAAGAACAGCTGGCTGA
AGCGTTGCGTGAGAAAACGCCTGGGCAAAAGCTTGGCGATGCGTTGCTGCAGCGAGGTTACATCACAGAGCAGCAGCTCA
TTGAGGCGCTTGAGTTTCAGCTCGGCATTCCTCATGTCAGCTTGTATCGCTACCCGATTGATCCGAAAGCGACGAGCTTA
GTGCCAAAAGAGTTTGCTCGCCGCCATCTGATCATGCCCCTTAAGGTGGAAGACGATCGATTGCTCGTTGCAATGGCTGA
TCCAATGGATTTTTTTGCTATTGATGATTTGCGCTTGTCAACGGGGTTTCAGATCGAAACAGCGATCGCTTCAAAGGATG
ATATTTTGCGGGCGATCAATAAATATTATGACATGGACGAATCGTTTGATGATTTGCTGCCAGCGCCGCCGACGGAGATG
CGCGAAGACGGTCGGACGGCCGAGGACGATTCCCCGATTGTTCGCCTAGTGAACCAAATTTTGCAGCTTGCTGTCGAACA
GCGGGCAAGCGATATTCATATCGATCCGCAGGAGACAAAAGTGCTCATCCGTTATCGAATTGACGGCTTGCTTCGAACGG
AGAGGGCGCTGCCGAAACATATGCAAAGCATGTTGACGGCGAGGATCAAAATTTTGGCCAACATGGACATCACCGAGCAT
CGTGTGCCGCAAGACGGGCGGATCAAAATGAACATCGATTTTCATCCCGTTGATTTGCGCGTGTCGACATTGCCGACGGT
GTATGGGGAGAAAATCGTGATGCGCGTCCTCGATTTGGGTGCGGCGTTAAACGATATTCATAAACTTGGCTTCAACCCGG
TCAATTTAGATCGGTTCATCCGTTTGATCGAGCGTCCGAACGGCATCATTTTGATCACCGGGCCGACCGGTTCGGGGAAA
TCGTCGACGCTTTACGCGGCGCTCAATCATTTAAACAGCGAACATGTCAACATCATTACGATCGAAGATCCGGTTGAATA
TCAGATCGAAGGCGTCAACCAAATTCAAGTCAACCCGAATGTCGGCTTAACGTTTGCCCAAGGGCTTCGCTCGATTTTGC
GCCAAGACCCGAACATCATCATGGTCGGGGAGATTCGCGACCGCGAGACGGCGGAAGTGGCGATCCGCGCCTCACTCACC
GGGCATTTAGTGTTAAGCACGCTCCATACGAACGATGCGTTAAGCACGATCACCCGCCTGATCGATATGGGGATTGAGCC
GTTTTTAGTGGCCACATCGCTCGCTGGCGTTGTCTCGCAGCGGCTTGTGCGCCGCATCTGCCGCGACTGCCAGGAGGTGT
ATGAGCCGACGAAGCGGGAGCGGGACATTTTCGCCCGTCGGGGCATCGACATCCGCCAACTCGTCCGTGGCCGCGGCTGC
CCGACGTGCAATATGACCGGTTACCGCGGGAGACTCGCGATCCACGAATTGCTTGTCATGACGGACGAGATGCGCCGCGT
CATTTTAAACAATGAGCCGTTTTCGAAGTTGCGGGAACTCGCCATTCAAAACAAAATGATCTTTTTGCTCGATGACGGGC
TGTTGAAAGTGAAGCAAGGGTTGACGACGCTTGAAGAAGTGCTGAAAGTGGCCATTTTGCATTGA

Protein sequence :
MNKKRERKRLGDLLVEAGLITEEQLAEALREKTPGQKLGDALLQRGYITEQQLIEALEFQLGIPHVSLYRYPIDPKATSL
VPKEFARRHLIMPLKVEDDRLLVAMADPMDFFAIDDLRLSTGFQIETAIASKDDILRAINKYYDMDESFDDLLPAPPTEM
REDGRTAEDDSPIVRLVNQILQLAVEQRASDIHIDPQETKVLIRYRIDGLLRTERALPKHMQSMLTARIKILANMDITEH
RVPQDGRIKMNIDFHPVDLRVSTLPTVYGEKIVMRVLDLGAALNDIHKLGFNPVNLDRFIRLIERPNGIILITGPTGSGK
SSTLYAALNHLNSEHVNIITIEDPVEYQIEGVNQIQVNPNVGLTFAQGLRSILRQDPNIIMVGEIRDRETAEVAIRASLT
GHLVLSTLHTNDALSTITRLIDMGIEPFLVATSLAGVVSQRLVRRICRDCQEVYEPTKRERDIFARRGIDIRQLVRGRGC
PTCNMTGYRGRLAIHELLVMTDEMRRVILNNEPFSKLRELAIQNKMIFLLDDGLLKVKQGLTTLEEVLKVAILH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 8e-89 44
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-89 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GK2629 YP_148482.1 ATPase involved in pili biogenesis VFG2048 Protein 7e-89 45
GK2629 YP_148482.1 ATPase involved in pili biogenesis VFG1876 Protein 3e-86 45
GK2629 YP_148482.1 ATPase involved in pili biogenesis VFG2426 Protein 2e-73 43