Gene Information

Name : GK1972 (GK1972)
Accession : YP_147825.1
Strain : Geobacillus kaustophilus HTA426
Genome accession: NC_006510
Putative virulence/resistance : Virulence
Product : transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 2016959 - 2018242 bp
Length : 1284 bp
Strand : -
Note : -

DNA sequence :
ATGGCGTTAGTCGTCTTTATCGGGTCGCTTTTAGGGGTCATGGCGCTCGGGATGCCGATCGCGTTTGCGCTGCTTGTCAG
CGGCGTTGCTCTCATGTTTTACTTGAATATTTTTGATACGCAAATCATCGCGCAAAATTTAATCAGCGGCGCGGACAGCT
TTCCTCTGATGGCGATTCCGTTCTTTATGCTCGCTGGGGAGCTGATGAACGCCGGCGGCATTTCGAAGCGGATCATCCGC
TTTGCCATGGCGCTTGTCGGCCATATCCGCGGCGGGCTCGGATATGTGGCGATCATCGCAAGCGTGCTGTTTGCCGGTTT
GTCGGGGTCGGCGGTGGCCGATACGGCGGCGCTTGGGGCCATTCTCATCCCGATGATGGTGAAAGCCGGATACAACCGCA
ACCGGTCGGCCGGCCTCATCGCCGCCGGCGGCATCATCGCGCCGATCATTCCGCCGAGCATCCCGATGATCATCTTTGGG
GTGACGAGCGGCGTGTCGATTACGAAACTGTTTATGGCCGGCATTGTTCCGGGGATTCTGCTTGGGATTTCTTTGGCGGT
TTGTTGGTGGTGGGTGACCCGGAGAGATCAAGTGGACGTGCTTCCGCGCCAATCGGCGAAAGACATTTGGCGGGCGACCC
GCGAGGCGTTTTGGGCGTTGCTGCTGCCGGTGATCATCGTCGGTGGGCTGCGCGGAGGAGTGTTTACGCCGACCGAGGCG
GCGGTGGTGGCCGCGTTTTACGCGTTGATTGTCGGCTTGTGCATTTACCGTGAGCTGAAAGTGAAAGACTTGTTTCACGT
GCTCGTGGCCGCGGCGAAAACGACAAGTGTCGTCATGTTTTTGGTGGCAGCCGCCATGGTGTCGGCCTGGCTCATTACGG
TCGCCAACATTCCGGCGATCGTCACGGACGTGCTCGCGCCGCTCATCGATCATCCGCTGGCGCTGCTGCTGGCCATTAAC
GCCTTGGTGCTGCTTGTGGGGACGGCGATGGATTTGACGCCGACGGTGCTCATTTTGACGCCGGTGTTGATGCCGATTAT
TCAAAAAGCGGGAATCGACCCGGTGTACTTCGGGGTGCTGTTTATCCTGAACAACTGCATCGGGCTGCTCACGCCGCCGG
TCGGCACGGTGCTGAACGTCGCCTGCGGGGTCGGGAAAATCAGCATGGAAGACATTATGAAAGGAGTTTGGCCGTTTTTG
CTTGTGGAAACGCTCCTGTTGCTTTTGTTGATTTTCTTCCCGTCTCTTGTGACCGTGCCGCTCGGATGGTTTACGGGCAG
TTGA

Protein sequence :
MALVVFIGSLLGVMALGMPIAFALLVSGVALMFYLNIFDTQIIAQNLISGADSFPLMAIPFFMLAGELMNAGGISKRIIR
FAMALVGHIRGGLGYVAIIASVLFAGLSGSAVADTAALGAILIPMMVKAGYNRNRSAGLIAAGGIIAPIIPPSIPMIIFG
VTSGVSITKLFMAGIVPGILLGISLAVCWWWVTRRDQVDVLPRQSAKDIWRATREAFWALLLPVIIVGGLRGGVFTPTEA
AVVAAFYALIVGLCIYRELKVKDLFHVLVAAAKTTSVVMFLVAAAMVSAWLITVANIPAIVTDVLAPLIDHPLALLLAIN
ALVLLVGTAMDLTPTVLILTPVLMPIIQKAGIDPVYFGVLFILNNCIGLLTPPVGTVLNVACGVGKISMEDIMKGVWPFL
LVETLLLLLLIFFPSLVTVPLGWFTGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 1e-52 43
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 1e-52 43
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 1e-52 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GK1972 YP_147825.1 transporter VFG1110 Protein 6e-53 43