Gene Information

Name : GK1461 (GK1461)
Accession : YP_147314.1
Strain : Geobacillus kaustophilus HTA426
Genome accession: NC_006510
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1501487 - 1502299 bp
Length : 813 bp
Strand : +
Note : -

DNA sequence : 
ATGCATGGGTTGCAGGCGAAAGAGTTGACGCTATCCTATGGCGAGGCGATCGTTATTGACCGTTTAGACTTGACGATTCC
AAAAGGAAAAATCACGGTGTTCATCGGCGCGAACGGCTGCGGCAAGTCGACGTTGCTGCGCGCCTTGGCCCGGCTGCTAA
AACCAACAAGCGGCGCTGTGCTGCTGGATGGAAAAGAAATCGCCAAACAGCCGACAAAAGAAATCGCCCGCCGGCTCGCC
ATTTTGCCGCAGTCGCCTATGGCTCCGGAAGGACTGACCGTGTTGCAACTTGTGAAGCAAGGGCGCTACCCGTATCAAAC
GTGGTTCAAGCAATGGAGTGACGAAGATGAGCGGGCGGTTGTGCGGGCCCTAGAGGCAACTGGACTCGCCGAATTCGCCG
AGCGGCCGGTCGATTCGCTTTCCGGCGGACAGCGCCAACGCGCATGGATCGCCATGACATTAGCGCAAGAAACGGACATC
ATTTTGCTTGACGAGCCGACGACGTATTTGGATCTCGCGCATCAAATTGACATTTTAGATTTATTGTTTGAGCTGAATGA
AAAAGAACGGCGGACGATCGTCATGGTGCTTCACGATTTGAATTTAGCGTGCCGTTACGCCCATCATCTCGTCGCCATTC
GCGATAAAACGGTGTATGCCGAAGGAAAGCCGGAAGACGTCATTTCCCGCCAGCTCGTGAAAGATGTGTTCCAAATGGAT
TGCCAAATCACGTACGATCCGATCTTTGGCACCCCGCTTTGCATTCCGTATGGGAAAGGACGGCGAATTTTACAGAAAGA
AGGCGTATCGTGA

Protein sequence : 
MHGLQAKELTLSYGEAIVIDRLDLTIPKGKITVFIGANGCGKSTLLRALARLLKPTSGAVLLDGKEIAKQPTKEIARRLA
ILPQSPMAPEGLTVLQLVKQGRYPYQTWFKQWSDEDERAVVRALEATGLAEFAERPVDSLSGGQRQRAWIAMTLAQETDI
ILLDEPTTYLDLAHQIDILDLLFELNEKERRTIVMVLHDLNLACRYAHHLVAIRDKTVYAEGKPEDVISRQLVKDVFQMD
CQITYDPIFGTPLCIPYGKGRRILQKEGVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-63 51
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-63 51
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-62 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-58 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-58 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-58 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-58 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-53 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-53 46
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GK1461 YP_147314.1 iron(III) dicitrate ABC transporter ATP-binding protein BAC0164 Protein 1e-53 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GK1461 YP_147314.1 iron(III) dicitrate ABC transporter ATP-binding protein VFG0925 Protein 3e-66 52
GK1461 YP_147314.1 iron(III) dicitrate ABC transporter ATP-binding protein VFG1042 Protein 1e-53 47