Gene Information

Name : fliP (GK1234)
Accession : YP_147087.1
Strain : Geobacillus kaustophilus HTA426
Genome accession: NC_006510
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1249029 - 1249697 bp
Length : 669 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGAGTGAATTTGTCCATATGTTTGATTCGATGGCTCCCGAGCACGTGTCGACAGCGGTGAAGCTTCTTCTGCTGCTCAC
CGTTTTGTCGATCGCTCCCGGCATTCTCATTATGATGACATGTTTTACGCGCATCGTCATCGTTTTGTCGTTTGTGCGCA
CGGCGCTCGGCACGCAGCAGATGCCGCCGAACCAAGTGCTCGTCGGGCTCGCGCTGTTTTTAACATTTTTCATTATGGCG
CCAACCTGGAAAGAAATCAACGACCAGGCATTGCAGCCGCTGTTTGCCGACAAAATTGATTTGGAGGAGGCGTATGAACG
GGCGGCTGTTCCGCTGAAGCAGTTTATGAGCCAATACACAAGGCAGGAAGATTTGGCGCTGTTTTTATCATACAGCGGCG
CCAAACAGCCGAAAACGATCAACGACATCCCGATGACCGCGCTCGTGCCGGCGTTTGCCATCAGTGAGTTGAAAACGGCG
TTTCAAATGGGCTTTATGATTTTTATTCCGTTTTTAGTCATCGACATGATCGTCGCCAGCGTCTTAATGTCGATGGGGAT
GATGATGCTGCCGCCTGTGATGATTTCGCTGCCGTTTAAAATTTTATTGTTTGTCCTTGTTGATGGCTGGCATTTGGTCG
TCAAATCATTGTTGCAAAGTTTTCAATAA

Protein sequence : 
MSEFVHMFDSMAPEHVSTAVKLLLLLTVLSIAPGILIMMTCFTRIVIVLSFVRTALGTQQMPPNQVLVGLALFLTFFIMA
PTWKEINDQALQPLFADKIDLEEAYERAAVPLKQFMSQYTRQEDLALFLSYSGAKQPKTINDIPMTALVPAFAISELKTA
FQMGFMIFIPFLVIDMIVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWHLVVKSLLQSFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-22 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-22 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_147087.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-45 56
fliP YP_147087.1 flagellar biosynthesis protein FliP VFG2016 Protein 4e-45 56
fliP YP_147087.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-42 55
fliP YP_147087.1 flagellar biosynthesis protein FliP VFG2494 Protein 7e-44 54