Gene Information

Name : TTHA1733 (TTHA1733)
Accession : YP_144999.1
Strain : Thermus thermophilus HB8
Genome accession: NC_006461
Putative virulence/resistance : Resistance
Product : copper-transporting ATPase CopB
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1624029 - 1626104 bp
Length : 2076 bp
Strand : +
Note : similar to GB:AAS81713.1 percent identity 93 in 680 aa

DNA sequence : 
ATGAAGGACAAGCCTACTGGTCACGCACACGAGCATCGTCACCATCCTTCCCACTCCAAACCCGAGCACGCGCCCCCCTC
TGGGGGGCACGCTTCCCGCACAGGCCACGGCAAGCACGCCGGCCATACCCCGGAGATGTTCCGGGACCGCTTTTTCGTAA
GCCTCCTCCTCACCCTCCCCATCCTCTACTTCTCCGAGCAGCTCCAGACCTGGCTCGGCTACCGGGCGTTGGCCTTCCCG
GGAAGCGCCTGGGTGAACCCCGTCTTGGGCACGATCCTTTACTTCTACGGGGGCCTGGTCTTCCTAAAGGGGGCCCTGGG
GGAGCTCCGCGAGCGGGCGCCGGGCATGATGACCCTCATCGCTTTGGCCATCACCGTGGCCTACGGCTACAGCCTCGCCG
TCTCCTTGGGGCTTCCCGGCATGCCCTTTTACTGGGAGCTCGCCACGCTCATAGACGTCATGCTCCTCGGCCACTGGCTG
GAGATGGCCTCGGTGCAGGCGGCAAGCCGAGCCCTGGAGGAGCTCGCCAAGCTCATGCCCGCCACCGCCCACAGGATCAC
GGGGGACCGCATAGAGGATGTCCCCGTCACCGCCCTGAAGGAGGGGGACCTCATCCTCGTCCGCCCGGGAGAACAGGTGC
CCGCGGACGGGGTGGTGGAGGAAGGGGCCTCCAGCGTGAACGAGGCCTTCCTCACCGGGGAGTCCCGGCCCGTGCCCAAA
GGCGTGGGGGACGAGGTCCTCGCCGGCGCGGTGAACGGGGAAGGGAGCCTCAAGGTCCGGGTCACGCGCACGGGCGAGGC
CACCACCCTAAGCCAGGTGATGCGGCTGGTGCAGGAGGCCCAGGCCTCCCGGAGCCGCTTCCAGGCCCTGGCGGACCGGG
CCGCGGGGTGGCTCTTCTACATCGCCGTGGCCCTGGGCATGCTCACCTTCCTCGTCTGGCTCGCCCTGGGACGGGACTTC
AACTTCGCCCTCTCCCTGGCGGTCACCGTGCTCGTCATCGCCTGCCCCCACGCCCTAGGCCTCGCCATCCCTCTGGTCAC
CGTGAACGCCACGGCCCTCGCCGCGAAAAACGGCATCCTGGTGCGGAACCGCGAGGCGTTTGAGCGGGGCCGGGAGATCC
GCTTCGTAGCCTTGGACAAGACGGGGACCCTCACCGAGGGGCGCTTCGCCGTCCGGGCGGTCTACGCCCACGAGACCTCG
GAGGAGGAGGCCCTCTCCCTGGCGGCGGCCCTCGAGGCCCTCTCGGAGCACCCCTTGGCCCAGGCCATCGTGGAAGCGGC
GGAAGGCAAGGGGCTTCCCCGCCCTGAGGTCCGGGACTTCCAGGCGGTCCCCGGAAAAGGCGTGGAGGGCACCTTGGGGG
GCAAGCGGTACCGGGTGGGCCGGCCCGAGTGGGCGGAGGAGCTCGGCCTAAAGGTCTCCGAGCCCTTGAAGCGGGGGCTG
AAGGAGGCCGAGGCCCGCGGGGAAAGCGTGGTGGCCCTGATGGACGAGGCGCGGGTTTTGGCCTTGCTCGCCTTGGCCGA
CCGCATCCGCCCCTCCGCCAAGGAGGCCATCCGGCGCCTTAAGGCCATGGGGATCACCCCCGTCATGATCACCGGGGACG
CCGAGGCCGTGGCCAGGACCGTGGCCCAGGAGCTGGGGATAGAACGCTACCACGCCCGGGTCCTCCCGGAGGACAAGGCC
CGGCGGGTGCGGGAGCTCAAACGGGAGGGCCCCACCGCTTTCGTCGGCGACGGCATCAACGACGCCCCCGCCCTCCTCGA
GGCCGACCTCGGCATCGCCATCGGGGCGGGGACCAACGTGGCCATAGAGGCGGCGGACCTCGTTCTGGTGGAGAGCGACC
CCCTGGACGTGGTCCGCGCCCTGACGCTCGCCCGGGCCACCCACGCCAAGATGGTGCAGAACCTCTTCTGGGCCACGGGC
TACAACGCCATCGCCCTGCCTTTGGCCGCCGGGGTGGCCTACCCTTGGGGAATCGTCCTCTCCCCGGCGGTGGGGGCCCT
CCTCATGAGCCTCTCCACGGTGGCGGTGGCGGTGAACGCCATGCTCCTCCGCCGCGCCGCCCTAACCGCCCTCTAA

Protein sequence : 
MKDKPTGHAHEHRHHPSHSKPEHAPPSGGHASRTGHGKHAGHTPEMFRDRFFVSLLLTLPILYFSEQLQTWLGYRALAFP
GSAWVNPVLGTILYFYGGLVFLKGALGELRERAPGMMTLIALAITVAYGYSLAVSLGLPGMPFYWELATLIDVMLLGHWL
EMASVQAASRALEELAKLMPATAHRITGDRIEDVPVTALKEGDLILVRPGEQVPADGVVEEGASSVNEAFLTGESRPVPK
GVGDEVLAGAVNGEGSLKVRVTRTGEATTLSQVMRLVQEAQASRSRFQALADRAAGWLFYIAVALGMLTFLVWLALGRDF
NFALSLAVTVLVIACPHALGLAIPLVTVNATALAAKNGILVRNREAFERGREIRFVALDKTGTLTEGRFAVRAVYAHETS
EEEALSLAAALEALSEHPLAQAIVEAAEGKGLPRPEVRDFQAVPGKGVEGTLGGKRYRVGRPEWAEELGLKVSEPLKRGL
KEAEARGESVVALMDEARVLALLALADRIRPSAKEAIRRLKAMGITPVMITGDAEAVARTVAQELGIERYHARVLPEDKA
RRVRELKREGPTAFVGDGINDAPALLEADLGIAIGAGTNVAIEAADLVLVESDPLDVVRALTLARATHAKMVQNLFWATG
YNAIALPLAAGVAYPWGIVLSPAVGALLMSLSTVAVAVNAMLLRRAALTAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 8e-100 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TTHA1733 YP_144999.1 copper-transporting ATPase CopB BAC0629 Protein 2e-157 57
TTHA1733 YP_144999.1 copper-transporting ATPase CopB BAC0079 Protein 5e-127 46
TTHA1733 YP_144999.1 copper-transporting ATPase CopB BAC0383 Protein 2e-113 45
TTHA1733 YP_144999.1 copper-transporting ATPase CopB BAC0101 Protein 6e-76 42
TTHA1733 YP_144999.1 copper-transporting ATPase CopB BAC0183 Protein 5e-83 41
TTHA1733 YP_144999.1 copper-transporting ATPase CopB BAC0102 Protein 5e-79 41
TTHA1733 YP_144999.1 copper-transporting ATPase CopB BAC0012 Protein 3e-80 41