Gene Information

Name : ssbA (str1845)
Accession : YP_142174.1
Strain : Streptococcus thermophilus CNRZ1066
Genome accession: NC_006449
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1646629 - 1647021 bp
Length : 393 bp
Strand : -
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGTATAACAAAGTAATTTTAATTGGACGTTTAACAGCTACTCCTGAAATGGTTAAGACTGCTAGCGATAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCCTCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGCCAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGACAATGACTTGGCTGACCTGATTTTAGAAGAAGAGCTTCCCTTTTAG

Protein sequence :
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLILEEELPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-18 50
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 4e-18 50
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-18 50
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 1e-21 49
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 1e-21 49
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 4e-16 48
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 9e-21 46
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-17 46