|
Name : secA (stu1730) Accession : YP_140144.1 Strain : Streptococcus thermophilus LMG 18311 Genome accession: NC_006448 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 1541273 - 1543822 bp Length : 2550 bp Strand : - Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGGCAAATATATTACGCAAAATCATTGAAAATGATAAGGGCGAAATTAAAAAACTAGAAAAAACTGCCAAGAAAGTTGA GAGCTATGCTGATGCAATGGCGGCTCTTTCAGATGAAGAACTTCAGGCAAAAACAGAAGAATTTAAACAACGATATCAAA ACGGAGAAAGTCTAGATCAGCTCTTGCCGGAGGCATTTGCGGTTGTTCGTGAGGGAGCGAAACGTGTCCTTGGACTTTTC CCATATCGTGTGCAAATTATGGGTGGTATTGTGCTTCACCATGGTGACGTAGCGGAGATGCGTACAGGGGAAGGGAAAAC CCTTACTGCGACAATGCCTGTCTACTTGAATGCTATTTCAGGTGAAGGTGTACACGTTATCACCGTTAACGAATACCTTT CAGAGCGTGATGCGACTGAAATGGGTGAGCTTTATAGTTGGCTCGGTTTGTCAGTAGGGATCAACCTTTCATCTAAATCA CCAGCTGAAAAACGTGAAGCTTATAATTGTGACATCACTTACTCAACCAGCTCAGAGGTAGGTTTCGACTATCTTCGTGA TAATATGGTTGTTCGTAAGGAAAACATGGTACAACGCCCATTGAACTTTGCCTTGGTCGATGAGGTTGACTCGGTTCTTA TTGATGAAGCTCGTACACCATTGATCGTATCAGGGCCTGTAAGTTCAGAAACTAATCAGTTGTATCACCGTGCGGATGCT TTTGTTAAGACATTGACTGAAGATGATTATGCGATTGATATTCCAACAAAAACAATTGGTTTGAATGACTCAGGTATTGA CAAGGCTGAAGAGTTCTTCAACTTGGAAAATTTGTACGATATTGACAATGTTGCCTTGACTCACTATATTGACAATGCCC TTCGTGCCAACTACATTATGTTGCGTGATATTGACTACGTGGTAAGTCCTGAGCAAGAAATCCTTATTGTTGACCAATTT ACTGGTCGTACCATGGAAGGTCGTCGTTTTTCAGATGGGCTCCACCAAGCCATTGAGGCTAAAGAAGGTGTACCAGTCCA AGAGGAAACCAAGACTTCTGCCTCAATCACTTACCAAAATATGTTCCGTATGTACAAGAAATTGTCAGGTATGACTGGTA CTGGTAAGACTGAAGAGGATGAATTCCGTGAAATCTATAACATGCGAGTCATCCCAATTCCAACAAACCGTCCAATTCAA CGTATTGACCATGATGACCTTCTGTACTCAACTTTGGATGCTAAATTCCGTGCTGTGGTACAAGATGTTAAGCGTCGTTA TGAGAAGGGGCAACCAGTTCTTATTGGTACGGTTGCCGTTGAAACATCTGACTTGATTTCTAAGATGTTGGTTGACGCAG GTATTCCTCACGAAGTGCTTAATGCCAAGAACCACGAAAAAGAAGCGCATATTATCATGAATGCAGGTCAACGTGGTGCT GTTACGATTGCGACCAATATGGCCGGTCGTGGTACTGACATCAAACTTGGTGAAGGTGTTCTGGAGCTTGGTGGACTTTG TGTCATTGGTACAGAGCGTCATGAAAGTCGTCGTATCGACAACCAGTTGCGTGGTCGTTCGGGACGTCAAGGGGATCCAG GGGAGTCTCAATTCTACCTATCTCTTGAAGACGAATTGATGCGTCGTTTCGGTTCTGACCGTATCAAGCATGTCTTGGAA CGTTTGAACGCTGATGACGAAGATATTGTTATCAAATCACGTATGTTGACTCGTCAAGTGGAATCAGCTCAAAAACGTGT CGAAGGGAATAACTACGATACTCGTAAACAAGTCCTTCAGTACGATGACGTTATGCGTGAACAGCGTGAAATCATCTACG CTGAGCGTTATGATGTTATTACAGCAGAACGTGACCTTGAACCTGAAATCAAGGCTATGATCAAGCGTACTATTAACCGT ACGGTTGATGGACACAGTCGTAACGATCAAGAAGAAGCTCTTAAAGGTATCTTGAACTTTGCACGTCAGGCCTTGGTTCC TGAGGATGCCATCTCACTTGAAGATCTAAAAGAAGTGGGAGAGGTGACTAAACGTAGTGTTAATTATGATGCTATCAAGG TTTATCTGACTGAGTTAGCAGATAATGTTTATGATCGTCAAATTAAGAAATTGCGTTCAGAGGAGGCTATTCGCGAATTC CAAAAAGTCTTGATTTTGATGGTTGTTGATAATAAGTGGACAGACCACATTGATGCCCTTGATCAATTACGTAACGCCGT TGGTATGCGTGGTTATGCGCAAAACAACCCAATCGTTGAGTATCAATCTGAAAGTTTCAAGATGTTCCAAGATATGATTG GTGCTATTGAGTATGATGTAACTCGTACGATGATGAAAGCACAAATCCACGAACAATCTCGTGAACATGTTAATGAACGT GTTTCAACAACAGCAACAGGCAATATTCAAGCACATCAAGCAGATGCTAACGGTCAAGAGATTGACTTTAGCAAGGTTGG TCGTAATGACTTCTGTCCATGTGGCTCTGGTAAGAAATTCAAAAATTGTCACGGTCGTAAACAGTTTTAG Protein sequence : MANILRKIIENDKGEIKKLEKTAKKVESYADAMAALSDEELQAKTEEFKQRYQNGESLDQLLPEAFAVVREGAKRVLGLF PYRVQIMGGIVLHHGDVAEMRTGEGKTLTATMPVYLNAISGEGVHVITVNEYLSERDATEMGELYSWLGLSVGINLSSKS PAEKREAYNCDITYSTSSEVGFDYLRDNMVVRKENMVQRPLNFALVDEVDSVLIDEARTPLIVSGPVSSETNQLYHRADA FVKTLTEDDYAIDIPTKTIGLNDSGIDKAEEFFNLENLYDIDNVALTHYIDNALRANYIMLRDIDYVVSPEQEILIVDQF TGRTMEGRRFSDGLHQAIEAKEGVPVQEETKTSASITYQNMFRMYKKLSGMTGTGKTEEDEFREIYNMRVIPIPTNRPIQ RIDHDDLLYSTLDAKFRAVVQDVKRRYEKGQPVLIGTVAVETSDLISKMLVDAGIPHEVLNAKNHEKEAHIIMNAGQRGA VTIATNMAGRGTDIKLGEGVLELGGLCVIGTERHESRRIDNQLRGRSGRQGDPGESQFYLSLEDELMRRFGSDRIKHVLE RLNADDEDIVIKSRMLTRQVESAQKRVEGNNYDTRKQVLQYDDVMREQREIIYAERYDVITAERDLEPEIKAMIKRTINR TVDGHSRNDQEEALKGILNFARQALVPEDAISLEDLKEVGEVTKRSVNYDAIKVYLTELADNVYDRQIKKLRSEEAIREF QKVLILMVVDNKWTDHIDALDQLRNAVGMRGYAQNNPIVEYQSESFKMFQDMIGAIEYDVTRTMMKAQIHEQSREHVNER VSTTATGNIQAHQADANGQEIDFSKVGRNDFCPCGSGKKFKNCHGRKQF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 1e-140 | 41 |
