Gene Information

Name : arsB (pWCFS103_13)
Accession : YP_133727.1
Strain :
Genome accession: NC_006377
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 8294 - 9589 bp
Length : 1296 bp
Strand : +
Note : -

DNA sequence : 
ATGCAAGTCTTTTTTGCTGTTTTTATATTTTTACTCACGTTATTATTCGTCATTTGGCAACCTAAGGGGCTATCAATAGG
CTGGACCGCAATTGGTGGGTCAGTACTTGCACTGCTATTTCGGGTCGTCACATTTAAAGATGTGGGTACCGTTACTGGGA
TCGTTTGGAACGCCACTTTGTCGTTTGTTGCCATTATTTTGATCTCATTGATTTTAGATGAGATCGGCTTTTTCGAGTGG
GCCGCTTTACATATGGCACGACTGGCTAAAGGCAATGGTGTACGTATGTTCATTTTGATCGTTATTTTAGGTGCGATCGT
GGCGGCACTTTTTGCCAACGATGGGGCGGCATTGATTTTAACGCCGATCGTTCTGGCAATGGTGCGAGCCCTACATTTTG
ATGAAAAAAAGGTTTTCCCATTTATTATTGCCAGTGGCTTTATTGCCGATGCGACTTCGTTACCATTAGTTGTTAGTAAT
CTAGTCAATATTGTTTCCGCTGACTTTTTCGGCATTACATTTTCCGAGTATGCCCTAAGAATGTGGATCCCTGATCTTTT
TTCACTGATCGCCAGCATCAGTATCTTATATTTGTATTTCCGCAAGGCCTTACCCAAACATTATGATGCAGATCAGGTTG
CTGAACCAAAATCTGCAATCAAAGATCAACGATTATTTAAGTTCTCTTGGGTCGTGTTAGCGGCGTTATTGATCGGTTAT
TTTAGCAGTAGTTTTCTAAACATTCCCGTTTCGTTTATTGCACTTACGATTGCCGCAATTTTCTTGTTGGTTGGTCAACA
AAGTCATCACGTTGATACTAAGGCAGTCATTAAAGGAGCACCGTGGAACATCGTCTTCTTTTCAATCGGAATGTATGTGG
TGGTTTATGGCCTACAAAATGTTGGCTTGACAACATTACTTGCTGGTGTTATCGCCAAAATGGCAACTGGTAGCCGGTTT
GTGGCGACCATGGGAATGGGTTATTTGGCAGCGTTCCTGTCATCAGCGATGAATAATATGCCAACGGTAATGATCAATGC
TTTATCGATCAAGGGCGCTAATGTATCAGGGTTAATGCACCAAACGTTAGTTTATGCAAATATTATTGGTTCTGATCTAG
GACCAAAGATCACACCAATCGGTTCGCTGGCGACGTTAGTGTGGTTACATGTTTTGGCGCAAAAAAACGTAAAAATTGCT
TGGGGTACTTATTTTAAAATTGGGATCACGATCACGATTCCAGTCCTATTCATTACATTATGTGGTTTATGGTTATCGCT
AAGTCTTTTTGGTTGA

Protein sequence : 
MQVFFAVFIFLLTLLFVIWQPKGLSIGWTAIGGSVLALLFRVVTFKDVGTVTGIVWNATLSFVAIILISLILDEIGFFEW
AALHMARLAKGNGVRMFILIVILGAIVAALFANDGAALILTPIVLAMVRALHFDEKKVFPFIIASGFIADATSLPLVVSN
LVNIVSADFFGITFSEYALRMWIPDLFSLIASISILYLYFRKALPKHYDADQVAEPKSAIKDQRLFKFSWVVLAALLIGY
FSSSFLNIPVSFIALTIAAIFLLVGQQSHHVDTKAVIKGAPWNIVFFSIGMYVVVYGLQNVGLTTLLAGVIAKMATGSRF
VATMGMGYLAAFLSSAMNNMPTVMINALSIKGANVSGLMHQTLVYANIIGSDLGPKITPIGSLATLVWLHVLAQKNVKIA
WGTYFKIGITITIPVLFITLCGLWLSLSLFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-124 68
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 9e-120 67
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-121 66
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 8e-97 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_133727.1 arsenical pump membrane protein BAC0574 Protein 4e-121 67
arsB YP_133727.1 arsenical pump membrane protein BAC0575 Protein 2e-123 66
arsB YP_133727.1 arsenical pump membrane protein BAC0578 Protein 1e-97 58
arsB YP_133727.1 arsenical pump membrane protein BAC0576 Protein 1e-97 58
arsB YP_133727.1 arsenical pump membrane protein BAC0031 Protein 2e-93 57
arsB YP_133727.1 arsenical pump membrane protein BAC0577 Protein 4e-97 56