Gene Information

Name : PBPRB0068 (PBPRB0068)
Accession : YP_131741.1
Strain :
Genome accession: NC_006371
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 85927 - 86622 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence :
ATGTCTTCAAAATCATCTTCCACCATTTTTTCAACATGGATTGGTGGCTACGAAATAAATAAGCATGTTACTAATCCCAA
TATCGAAGTGGGTGATTTCACGTATTATTCTGGTTATTACCATGATAAGCACTTTGAAGATCAATGTGTGCGTTACTTAC
TTGGGGATAGCTCTAGCCACAGTGTGTGGGAATCTGGGGTGTTTGGTGACGTCGATAAGCTGATCATCGGTAAATATTGC
TCTATTGCATCTGGTGCGACATTTATGTTGGCGGGTAATCAAGGGCATCGGCACGAATGGATATCCTCTTTCCCTTTCGA
TTACGAGGTATTTGGCGATAAAGTAAAATCTGGCTTTGAGTTGGCTGGTGATACCATCATTGGCAATGATGTCTGGGTAG
GCAGTGAATGTGTCATTATGCCTGGCGTAACAATTGGTGATGGTGCCGTTATTGGCGCACGGGCTGTGGTGACGAAAGAT
GTTGAACCATACACCATCGTTGTTGGTAATCCCGGTAATGCAGTGAAATCCCGTTTTACTGAATCCCAAATTGAAATGCT
GCTTGAAATGAAGTGGTGGAATTGGCCTATTGAAGTGTTACAAGCCAATATGGATTTGATGTGCAGCTCTGATATTGATG
GCTTATATCGACGATTTCTTCAGTTTCAGGATATGTTAAAAAGTACTGACGAATAG

Protein sequence :
MSSKSSSTIFSTWIGGYEINKHVTNPNIEVGDFTYYSGYYHDKHFEDQCVRYLLGDSSSHSVWESGVFGDVDKLIIGKYC
SIASGATFMLAGNQGHRHEWISSFPFDYEVFGDKVKSGFELAGDTIIGNDVWVGSECVIMPGVTIGDGAVIGARAVVTKD
VEPYTIVVGNPGNAVKSRFTESQIEMLLEMKWWNWPIEVLQANMDLMCSSDIDGLYRRFLQFQDMLKSTDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 9e-46 55
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 8e-45 54
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 8e-45 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRB0068 YP_131741.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 8e-46 58
PBPRB0068 YP_131741.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 4e-46 55
PBPRB0068 YP_131741.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 5e-45 54
PBPRB0068 YP_131741.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 5e-45 54
PBPRB0068 YP_131741.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 2e-46 52
PBPRB0068 YP_131741.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 2e-49 48
PBPRB0068 YP_131741.1 chloramphenicol acetyltransferase AM180355.1.gene2499. Protein 4e-33 43
PBPRB0068 YP_131741.1 chloramphenicol acetyltransferase CP000675.2.gene50.p0 Protein 1e-31 42
PBPRB0068 YP_131741.1 chloramphenicol acetyltransferase NC_011595.7057349.p0 Protein 2e-28 41
PBPRB0068 YP_131741.1 chloramphenicol acetyltransferase NC_010410.6000796.p0 Protein 2e-28 41