Gene Information

Name : PBPRB0309 (PBPRB0309)
Accession : YP_131982.1
Strain :
Genome accession: NC_006371
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 350958 - 352478 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence : 
ATGATTTATGCTCAACCAGGAACAGACAACGCAGTTATCACGTTCAAATCACATTACGATAACTATATTGGTGGCGAGTG
GGTAAAACCTGTCAGCGGGGAATATTTCGATAATATCTCACCTGTAAATGGTCAAATGTATTGTCAGGTCGCGCGTTCAA
CCGAAGCGGATATCAATTTAGCCTTAGACGCTGCACATAATATTCGCGCAACATGGGCAGCAACAAGTGTCACTGAACGA
TCAAATATATTATTAAAGATTGCCGATCGTATTGAACAAAACCTCGAATACTTGGCCGTTGCTGAAACATGGGAAAACGG
CAAGCCTGTTCGTGAAACATTGGTCGCTGATCTGCCTTTAATTGTTGATCACTTCCGCTATTTTGCGGGTTGTATTCGTG
CGCAAGAAGGTTCTGCGGCAGAGTTAGACCAAAATACCGCGAGCTATCATTTTCCTGAACCTGTCGGCGTAGTTGGTCAG
ATCATTCCTTGGAATTTCCCAATGCTAATGGCGGCATGGAAATTAGCCCCGGCACTGGCAGCAGGCTGTTGCGTTGTGTT
AAAACCAGCAGAACAAACACCCACCTCAATTTTAGTATTAATGGAATTAGTGGGCGACCTTCTTCCACCGGGGGTACTTA
ACGTTGTGAATGGCTACGGCAGTGAAGCAGGCCAAGCGTTAGCCACCAGCAACAGAGTCGCCAAACTGGCTTTCACTGGA
TCAACGGATGTGGGCCATCATATTCTTAAATGTGCCGCCGAGAGTTTAATTCCTTCCACCGTCGAGCTGGGGGGTAAATC
ACCCAATATCTTTTTTGCTGATATCTTTGATCACGAAGATGCATACCTTGATAAATGTATCGAGGGGATGTTGTTAGCCT
TCTTCAATCAAGGTGAAGTCTGTACTTGCCCGTCACGAGTGTTAATTCATGAATCTGTTTATGACAAATTCATTGCTAAA
GTGATAGAACGTGCAGCAGTGATCCAACAAGGCAACCCATTAGATACTAATACCCAAGTAGGCGCACAAGCCTCGCAAGA
GCAATTTGATAAGATCCTTGGCTACTTAGACATTGGCCGTGCTGAAGGCGCACAAGTACTCATCGGTGGGCAAGCTGCGA
CATTAAACGACGAGCTGGATAATGGTTTCTACATCCAACCGACGATGCTAAAAGGCCATAACAAAATGCGCGTATTCCAA
GAAGAAATCTTTGGGCCCGTTATCGCCATCACAACATTCAAAGACGAAGCTGAAGCATTGGAAATTGCCAATGATACTGA
GTATGGATTAGGTGCTGGCGTATGGACACGTGATGCAAACCTTGCTTACCGTATGGGTCGTAATATCGAAGCGGGCCGTA
TTTGGGTTAACTGTTATCACGCTTACCCAGCCCACGCTGCATTTGGGGGCTACAAGAAATCCGGTATCGGACGTGAAACC
CATAAGATGATGCTCGACCATTATCAGAATACTAAAAACCTTTTAGTCAGCTACGATATTAATCCATTGGGCTTCTTTTA
A

Protein sequence : 
MIYAQPGTDNAVITFKSHYDNYIGGEWVKPVSGEYFDNISPVNGQMYCQVARSTEADINLALDAAHNIRATWAATSVTER
SNILLKIADRIEQNLEYLAVAETWENGKPVRETLVADLPLIVDHFRYFAGCIRAQEGSAAELDQNTASYHFPEPVGVVGQ
IIPWNFPMLMAAWKLAPALAAGCCVVLKPAEQTPTSILVLMELVGDLLPPGVLNVVNGYGSEAGQALATSNRVAKLAFTG
STDVGHHILKCAAESLIPSTVELGGKSPNIFFADIFDHEDAYLDKCIEGMLLAFFNQGEVCTCPSRVLIHESVYDKFIAK
VIERAAVIQQGNPLDTNTQVGAQASQEQFDKILGYLDIGRAEGAQVLIGGQAATLNDELDNGFYIQPTMLKGHNKMRVFQ
EEIFGPVIAITTFKDEAEALEIANDTEYGLGAGVWTRDANLAYRMGRNIEAGRIWVNCYHAYPAHAAFGGYKKSGIGRET
HKMMLDHYQNTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-175 74
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 0.0 73
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 0.0 73
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 0.0 73
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 0.0 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRB0309 YP_131982.1 aldehyde dehydrogenase VFG0082 Protein 3e-175 74