Gene Information

Name : PBPRB0262 (PBPRB0262)
Accession : YP_131935.1
Strain :
Genome accession: NC_006371
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 298972 - 299649 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATACTGGTTATCGAAGATGATCTGACCACACGTGAATTTATCGCGAAAGGGTTACGTGAGCATGGCTTTGTCGT
CGACGAGGCAGGCGACGGTCATCAAGGCTTAATGATGGCCACCAGTTGCGAATACCAACTGATCATTTTAGATCGCATGC
TGCCTATTTTAGATGGCATAAAGGTTTTGGCAGCTATACGCGCAACTGAAAATCAAACTCCCATATTGATCCTCAGTGCC
ATGGATAGTGTGGAAGATCGTGTAACAGGACTGACAGCAGGTAGCGATGATTACTTAACCAAACCTTTTGCCCTCGCAGA
GTTGATTGCTCGCGCTCAAATATTAGTAAAACGCCACCACTCATCAACAAAAGTCGTGACTGAATATATTTACGATGATC
TACGATTAGATATGAAATCACACCGAGTATGGCGAGGCGAACGTTTACTTAATCTACAACAGAAAGAATTTTTATTACTG
CAATACTTAATGGAGCACGCTGAAAATGTTGTCTCTAGAATGAGCTTATTTGAATCAGTGTGGAGTTATCACTTCGACCC
TAAAACCAATGTGATTGATGTACATATTGCAAACCTGCGTAAAAAATTAGAAGAAAATGGTGAGTTAGGTTTAATCCATA
CAATCCGAGGTGCAGGCTATGTCCTTCGCAGGTCCTGA

Protein sequence : 
MKILVIEDDLTTREFIAKGLREHGFVVDEAGDGHQGLMMATSCEYQLIILDRMLPILDGIKVLAAIRATENQTPILILSA
MDSVEDRVTGLTAGSDDYLTKPFALAELIARAQILVKRHHSSTKVVTEYIYDDLRLDMKSHRVWRGERLLNLQQKEFLLL
QYLMEHAENVVSRMSLFESVWSYHFDPKTNVIDVHIANLRKKLEENGELGLIHTIRGAGYVLRRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-33 47
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-33 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRB0262 YP_131935.1 DNA-binding response regulator BAC0125 Protein 6e-38 46
PBPRB0262 YP_131935.1 DNA-binding response regulator BAC0083 Protein 6e-35 45
PBPRB0262 YP_131935.1 DNA-binding response regulator BAC0197 Protein 3e-32 43
PBPRB0262 YP_131935.1 DNA-binding response regulator BAC0347 Protein 6e-35 42
PBPRB0262 YP_131935.1 DNA-binding response regulator BAC0308 Protein 2e-36 42
PBPRB0262 YP_131935.1 DNA-binding response regulator BAC0111 Protein 9e-38 42
PBPRB0262 YP_131935.1 DNA-binding response regulator BAC0638 Protein 8e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRB0262 YP_131935.1 DNA-binding response regulator VFG0596 Protein 1e-33 47
PBPRB0262 YP_131935.1 DNA-binding response regulator VFG1389 Protein 9e-37 46
PBPRB0262 YP_131935.1 DNA-binding response regulator VFG1390 Protein 3e-37 43