Gene Information

Name : PBPRB1879 (PBPRB1879)
Accession : YP_133529.1
Strain :
Genome accession: NC_006371
Putative virulence/resistance : Virulence
Product : C4-dicarboxylate transport system, integral membrane protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 2062481 - 2063782 bp
Length : 1302 bp
Strand : +
Note : -

DNA sequence : 
ATGGAATGGCAAGTCATTCTTACTCTATTTGGTAGCTTTGCGGTTCTCTTAACGTTAGGGGTCCCGGTTTCATTTGCTAT
TGGTCTGTCTTCGTTAGCAACCATTATGCTAAGCCTGCCACTTGAACCAGCAATTGCCGTGGTAGCACAGCGTATGGCGG
CAGGTCTTGATAACTTTGCACTACTTGCGATCCCGTTTTTTATCTTGGCGGGCAATATTATGAACCAAGGTGGTATTGCG
ATTCGCCTTATTAATTTTGCAAAAGTATTAGGTGGTCGTCTTCCTGGTTCCCTAGCGCATGTAAACATCATGGCGAATAT
GATGTTTGGTTCAATTTCAGGTTCAGCGGTAGCTTCTGCGGCAGCCGTTGGCGGTACGATGTCTCCTTTGCAAAAGAAAG
ATGGCTATGATGAGCATTTCTCTGCCGCGGTCAACATTACATCTTGCCCTACTGGTCTATTGATTCCACCGAGTAATACC
TTAATCGTATTCTCTTTAGTTTCTGGTGGTACATCGATTGCGGCACTATTTCTAGCAGGTTACATTCCAGGTCTGATTAT
GGGCTTGAGCTTAATGTGTGTCGCAGGTTTTATTGCCAAGCGCCGTGGCTACCCTGTCGCAGCAAAACCAAGTCTGGCAG
AAGTGTGGGATACATTATTAAGAGCATTACCTTCTTTAATGCTTATCGTCATTATTATGGGCGGTATTATTGGCGGTATC
TTCACCGCAACTGAAGCCTCAGCCATTGCGGTGGTCTATACCTTTATACTCGCGGTATTGATTTACCGTGAAGTGAAGTT
CCGCGATTTACCTAAAATCATTTTAGAATCAGCAGTGACAACCTCAATTGTTCTACTGTTAGTGGGTGCATCAATGGGCA
TGTCATGGGCAATGGCTAACGCCGATATCCCTTACATGATTGCCGACGCACTACTGGCTGTTTCTGATAACCCTCTCGTT
GTCTTATTGATTATCAACCTCATTTTATTAATTGTTGGTATCTTCATGGACATGACACCAGCAGTACTGATCTTCACGCC
TATCTTCTTGCCTATCGTATTAGATTTAGGTGTCGACCCTGTGCACTTCGGCATCATGATGACGTTTAACCTTGCGATTG
GTATTTGTACTCCGCCAGTAGGTAGCGCGTTATTCATTGGTTGTTCAGTTGCAAATGTATCGATTGATAAGATCATCAAA
CCATTATTACCTTTCTATGCGGCACTGGTTATTGCGCTAATGGCAGTTACCTTTATTCCACAGCTAAGCCTATTCCTACC
AGGTCTAGTTCTAGGTTACTAA

Protein sequence : 
MEWQVILTLFGSFAVLLTLGVPVSFAIGLSSLATIMLSLPLEPAIAVVAQRMAAGLDNFALLAIPFFILAGNIMNQGGIA
IRLINFAKVLGGRLPGSLAHVNIMANMMFGSISGSAVASAAAVGGTMSPLQKKDGYDEHFSAAVNITSCPTGLLIPPSNT
LIVFSLVSGGTSIAALFLAGYIPGLIMGLSLMCVAGFIAKRRGYPVAAKPSLAEVWDTLLRALPSLMLIVIIMGGIIGGI
FTATEASAIAVVYTFILAVLIYREVKFRDLPKIILESAVTTSIVLLLVGASMGMSWAMANADIPYMIADALLAVSDNPLV
VLLIINLILLIVGIFMDMTPAVLIFTPIFLPIVLDLGVDPVHFGIMMTFNLAIGICTPPVGSALFIGCSVANVSIDKIIK
PLLPFYAALVIALMAVTFIPQLSLFLPGLVLGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 5e-55 42
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 5e-55 42
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 4e-55 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRB1879 YP_133529.1 C4-dicarboxylate transport system, integral membrane protein VFG1110 Protein 2e-55 42