Gene Information

Name : PBPRA0885 (PBPRA0885)
Accession : YP_129099.1
Strain :
Genome accession: NC_006370
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1479
EC number : -
Position : 978676 - 980715 bp
Length : 2040 bp
Strand : +
Note : -

DNA sequence :
ATGAATCAAGTAAAAACCTATTTAAGAACGCCTCAAAGACTGGTAGATGAGCAGGCATTGTTTACTATTCCAAGCTACCA
ACGCCCTTTTGTATGGTCTGATGAGGCGATCAAAAGCCTGTTTGATGACCTTTTTTCAGCATTTGAGAGTAAGCAGCCAC
ACTATTATGTTGGCACTATTTTAACGGCTAAACGACCTGGACAAGTTTTAGAGTTAATTGATGGGCAGCAACGAACCACC
AGTTTGATGCTATTCGCCCTTGCCTGTAAAAAGAAAGAAATTAATACCCAACTCACAAAGCTAATTTGTGCGGAGCATCT
GCAAGAAGAGACACTACGTTTAAGTTTCAAAATTAGAACACAAGTGGAAGCTTATCTCGGACATATGGCGGGGCTGGAAA
ACTATGAAAACCAGTATCCAAGCGATACTGAGATCGAAAACAATCCTTACCTGAAACGCTTAGCCGCTGGACTAGCTACG
TTTGAAAATTTACTCGACCAAATCCCTTTTCCAGATAGCACAGATCAAGATGATACAGCTCAAGGTAACAATAACCGACG
TTCATCTTTAACAGATAAGCAAGCTGCCTTTGCTGACTACGTATATTCATCAATGCATATGGTTGAAAACCGTATCCCTA
CGTCAACGGATTTGAATCAGCTGTTTGCCACAATGAATAATTCAGGGGTACAGCTAGAGCAAGCAGACATCTTAAAGTCG
TTACTACTAAAGAACATCGAGACAGATAAAGCGACTTACAATACCATCTGGCAAGCATGTGAAAACATGGATAACTACTT
CGAGCGGAATGTTCGTAAGGTTTTCCCAAACACTAATTGGGCAAAAATGCAAAACAGTGATTTTGCTCAATATGATGCTG
GTATCTTCAACTTTGATAAAGCAGACGAAGATGAGAAACCGCTCCAAGGTATGACTATCGCTGAAATTATGGCTTCTGTA
GATAATCGAAGTGGTAGCCAAGCGAATAATAAATATCGCGATGTTGAGGAAGAAACCAGAGAAGTCTACTGTCATTCCAT
CATTAGTTTTCCTCAGTTATTGCTGCACACATATCGTATCTATTTGCAGAAATATGGTTTCGATGACTTCGTTCCTCGCT
TTCATTCAGATCAACTCATTGCGACTTTTGAACCTCTCTTGAATAGTGATGAAGAACAGATAAAACAGTTCTTCCAACTA
CTGTGGCAAGTGCGTTTTGCGTTTGATCTATGGATAGTAAAATGGGTAGAAAAGGCAGATGAGGTTGAAGAACAACTGCT
CCTTTGTAGCGTGAACGGCTCTTACTCAAACAATAACTATTATTTCAGCCGCAGCCCACTTGAACACTCAAATATTTCGA
TGCTCCAAATGGTGAGGCATTTCACTGCGGATAGAAATGCACAGTATTGGTTAACGCCTTTCTTAGGATGGCTAGTTGAA
AATAAACCAACGCAAGTTGAAAGAGCACAAGTAGTCAAACAACTTGAGTCGATCGATAATCAACTTTCATTAGCTATGGC
GGAACAAAAACCAGCGAGCTTTAAGTTGCTATCAAGTTCATTGGGTACATCAGAGGTTCAAGCTTCAAGCTTTATCAAAA
GCTACCTATCTGAAAAGAATGGCGTTAATTTTAGACATTATTGGTTTCAAAAATTGGAATACCTCTTGTGGAAACACAAC
AGTGATTACTTGAAAGATATCGATCAAAACAAATTTATGCGCTATCGCATTATCTCAAGAAACTCCGTGGAACATGTCCA
TCCTCAAAACGATGAGTATGGTAAACAGCTAGAAGACGGTTATTTAGATAGCTTTGGCAACTTAGCTTTGCTGAATGTGG
GCCAAAACTCGGCCTACAGTAACCAATCCGTAGGCAAAAAACGCGAAGATTTTAATGCAAAACCTCAGTATGACTCCTTA
AAACTCAAGCACATATATGATTTAATGCAAACAGAGAATGGTTTATGGGATGAATCAAAAATTCACTCACATCAGAACCA
GATGATCACATTATTAAAAGCACATTATTGTCAGTTGTAG

Protein sequence :
MNQVKTYLRTPQRLVDEQALFTIPSYQRPFVWSDEAIKSLFDDLFSAFESKQPHYYVGTILTAKRPGQVLELIDGQQRTT
SLMLFALACKKKEINTQLTKLICAEHLQEETLRLSFKIRTQVEAYLGHMAGLENYENQYPSDTEIENNPYLKRLAAGLAT
FENLLDQIPFPDSTDQDDTAQGNNNRRSSLTDKQAAFADYVYSSMHMVENRIPTSTDLNQLFATMNNSGVQLEQADILKS
LLLKNIETDKATYNTIWQACENMDNYFERNVRKVFPNTNWAKMQNSDFAQYDAGIFNFDKADEDEKPLQGMTIAEIMASV
DNRSGSQANNKYRDVEEETREVYCHSIISFPQLLLHTYRIYLQKYGFDDFVPRFHSDQLIATFEPLLNSDEEQIKQFFQL
LWQVRFAFDLWIVKWVEKADEVEEQLLLCSVNGSYSNNNYYFSRSPLEHSNISMLQMVRHFTADRNAQYWLTPFLGWLVE
NKPTQVERAQVVKQLESIDNQLSLAMAEQKPASFKLLSSSLGTSEVQASSFIKSYLSEKNGVNFRHYWFQKLEYLLWKHN
SDYLKDIDQNKFMRYRIISRNSVEHVHPQNDEYGKQLEDGYLDSFGNLALLNVGQNSAYSNQSVGKKREDFNAKPQYDSL
KLKHIYDLMQTENGLWDESKIHSHQNQMITLLKAHYCQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1766 NP_231401.1 hypothetical protein Not tested VPI-2 Protein 2e-132 43
VPI2_0014c ACA01831.1 hypothetical protein Not tested VPI-2 Protein 2e-131 43
VC0395_A1364 YP_001217307.1 hypothetical protein Not tested VPI-2 Protein 3e-131 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRA0885 YP_129099.1 hypothetical protein VFG1099 Protein 8e-133 43