Gene Information

Name : PBPRA0884 (PBPRA0884)
Accession : YP_129098.1
Strain :
Genome accession: NC_006370
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1479
EC number : -
Position : 977210 - 978679 bp
Length : 1470 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGCAAGGCGAGATTAACGAGTTACAAGTCGTAAGCTGTGATGTTGATGCGCTATTTAGCAATAGCGCAATTTCAAC
TAAAAATGGCATTCTTGAAGGTCAACTTTTCATTCCTGAATATCAGCGCCCCTATACATGGGGAGAAAAGGAAGTAAATC
GCTTGGTTGGTGATTTGATTGCTTACTTTTCGAGTGAGAAGCCACCAGAGCATCAATACTACCTTGGCAGCGTGATTATT
CATCAAAGTATCGTTGATGGCGTTACTCGCCTTAACGTGATTGATGGACAGCAACGCCTAACAACCTTAGCGATTCTTGC
CTATGTGCTTGGCTTACCCAACCAGCCAAGAATCACCTACACATCACCCAGTTCGCAGCAACAAATTGCTGCGAATGTTC
AGTGGTTAAAAACGTGGTTAGCTGATAATCGCGAAATAGAACATTGTGACCTAAAAGCACTCATCAAACTTGAACAAATC
AATATCACCCTTGTGATCACTGAGAGTGAAGATGATGCTTACCGATTTTTTGAAACCCAAAATACAGGCGGTGTTCGTTT
AAATGGTGCGGATATTATTAAGGCGCATCATCTAAGAGCGATTGAAGAAAAATATCAAGATAGCTATGCAAAACAATGGG
AATCGCTTGGTGAGTTGACGCCGCTTATTGATGCCATCATGAAGGTGCGTTATTGGCAAGCGTTTCGATTTAAGTCTCTA
CCCACACACCGCAAACCACACTTAGTCAAAACTGAAATCGTTAAAGAGTTAGCTGAATCTTGCTTAAATCAACCCGTTAA
CGTTGCTTACCGTACGGTTCAGGTAACAAAACCGCATACGGGAGTGGCAACCAATAGCCTATCGGGCATTCAAATTAACA
ATATCGATAACGGCTATGCCATGCGTCAGCCACTCAATTCAGGTATTAACACTATCGACTATCTGAGCTACTTTGCTCAA
CTACAACACGATCTGTTACTAAATGAACGAACGCTAGCTAACTTAGACGCTTTCTATGATTTCTATTTTAATGACGTAAT
TCAAAAATTAGATGGTACAGCCTACCTGAAAAAGTTGTTTGATAGCACTTTACTTCTGTATGTGAGCCAATTTGGTTTAA
CTCAACTTCATGAAGCCGCGCTATGGCTGTTTCGGATGGTGTACTCGCCTCGGGTAATCAATCAGAAAACCGTTAAAGAA
AGCTCGATTCAAAGCTTTGCAAGAGACAACAAGTTATTTGATTTCATTGTTCTAAGTTATACCCATGAGCAACTTATCGG
CTGGTTAAAAGAGTATTCCTATACCTTTGAAGGCTCAAACCTTGATGATAAAAAAGTCAAAGGACGCTTCATTATTAGGC
TTGAGAATTTCTTCAAACCCAAGACGTTTACGCGAGAAACCATTCAAACCAGTTTCGATAAACAACTGTGCCAAGCCATA
CAGAGCAAAGTGAATGAGGCTCAAACATGA

Protein sequence : 
MSQGEINELQVVSCDVDALFSNSAISTKNGILEGQLFIPEYQRPYTWGEKEVNRLVGDLIAYFSSEKPPEHQYYLGSVII
HQSIVDGVTRLNVIDGQQRLTTLAILAYVLGLPNQPRITYTSPSSQQQIAANVQWLKTWLADNREIEHCDLKALIKLEQI
NITLVITESEDDAYRFFETQNTGGVRLNGADIIKAHHLRAIEEKYQDSYAKQWESLGELTPLIDAIMKVRYWQAFRFKSL
PTHRKPHLVKTEIVKELAESCLNQPVNVAYRTVQVTKPHTGVATNSLSGIQINNIDNGYAMRQPLNSGINTIDYLSYFAQ
LQHDLLLNERTLANLDAFYDFYFNDVIQKLDGTAYLKKLFDSTLLLYVSQFGLTQLHEAALWLFRMVYSPRVINQKTVKE
SSIQSFARDNKLFDFIVLSYTHEQLIGWLKEYSYTFEGSNLDDKKVKGRFIIRLENFFKPKTFTRETIQTSFDKQLCQAI
QSKVNEAQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1767 NP_231402.1 hypothetical protein Not tested VPI-2 Protein 1e-87 45
VC0395_A1365 YP_001217308.1 hypothetical protein Not tested VPI-2 Protein 1e-87 45
VPI2_0015c ACA01832.1 hypothetical protein Not tested VPI-2 Protein 5e-88 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRA0884 YP_129098.1 hypothetical protein VFG1100 Protein 6e-88 45