Gene Information

Name : PBPRA0392 (PBPRA0392)
Accession : YP_128626.1
Strain :
Genome accession: NC_006370
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 394724 - 395947 bp
Length : 1224 bp
Strand : +
Note : -

DNA sequence :
ATGAATTCACCACAAACACAAAAGATTGAAAGCAAGATGCGTGATATTCAAATACTACACGAGTCGCTGGAAAATCAATG
CCCTAACATTCACAAAAAGAGACTCAAATCACTCATGGACTCTGTGCAAGCATTGCTTAGCAATGATGCACTTACGCTTA
CTTTACTTGGACGTTCGCTTCCTTCAAAGGCCAAAACGAAACACTGTATTAAGCGCGTTGACCGTTTATTAGGTAACAAT
CACCTGCACCACGACAGACTCGATATTTATCGTTGGCACTGTCATCAATTTTGTTCGGTCAATCCACAACCTATTGTCTT
AGTCGATTGGGCTGATATTCGCGAATACGAACGACTCATGGTACTAAGAGCTTCTATTGCTGTAGAAGGACGTTCTGTTA
CGCTTTTCGAGCAAACTTTTACCTTTAAAAACTACAATTCTCCGCGCAGTCATCAGCAGTTTCTCGATAATTTCAAAGCT
GTTTTGCCTTCGCATGTCATCCCCATTATCGTGACTGATGCTGGCTTTCGTAATACCTGGTTTAGGCAGGTTGATGACAT
GGATTGGTGTTATCTTGGACGTGTCAGAGGAGACGTAAACGTCTTAATAAAAAACCAATGGCAACACATCAAGCAGTTGT
TTATTAAAGCGAATAGCAAACCTAAATATGTAGGATTCACACAGCTTGCCAAACGAAAACCATTACAATGTCATCTTCAC
CTCTATAAAAAACAAACACCTAAAAAACGTAAAGACCGACCAAAAGGTCGAGAGCATTTCTCCGCCCAAGCCGTCCATAA
GAAGTCAGCACTAGAACCTTGGTTGCTGGCGACTAATCTCCCAACAGATATATTTTCATCTCGGTGTATCGTCAGGCTCT
ACACCAAACGTATGCAAATTGAAGAAACGTTCCGTGACTTAAAAAGTCCGCAATACGGCTTTGGCTTACGCCAAAGCCGA
ACCCATGATCCTAAACGGTTCGATATTTTGCTGCTCATTGGTCTGCTCGCTTTTATGGTCTATTGGTGGTTTGGAATAAT
TGCAGAGCATAACGGTTGGCACCGTCATTTTCAGGCAAATTCAGTAAAAGACCGACGAGTTTTATCATTTGTTAGGCTAG
GAAAAGAGGTCTTCCGACGGCTGGAATATCACATCAACGAACCAGCAATACGTTGGGCGCAATGCACCCTTATTCTAATG
GCGAGGAAGAGTTATCGTGCGTAA

Protein sequence :
MNSPQTQKIESKMRDIQILHESLENQCPNIHKKRLKSLMDSVQALLSNDALTLTLLGRSLPSKAKTKHCIKRVDRLLGNN
HLHHDRLDIYRWHCHQFCSVNPQPIVLVDWADIREYERLMVLRASIAVEGRSVTLFEQTFTFKNYNSPRSHQQFLDNFKA
VLPSHVIPIIVTDAGFRNTWFRQVDDMDWCYLGRVRGDVNVLIKNQWQHIKQLFIKANSKPKYVGFTQLAKRKPLQCHLH
LYKKQTPKKRKDRPKGREHFSAQAVHKKSALEPWLLATNLPTDIFSSRCIVRLYTKRMQIEETFRDLKSPQYGFGLRQSR
THDPKRFDILLLIGLLAFMVYWWFGIIAEHNGWHRHFQANSVKDRRVLSFVRLGKEVFRRLEYHINEPAIRWAQCTLILM
ARKSYRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
IS10 CAI43894.1 transposase for IS10 Not tested LEE Protein 3e-90 51
SF2983 NP_708757.1 iso-IS10R ORF Not tested SHI-1 Protein 4e-90 51
tnp AEA34674.1 IS10 transposase Not tested Not named Protein 1e-89 50
tnp AEA34664.1 IS10 transposase Not tested Not named Protein 1e-89 50
IS1999 CAJ77042.1 Insertion sequence Not tested AbaR1 Protein 2e-89 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PBPRA0392 YP_128626.1 transposase VFG0647 Protein 2e-90 51