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Name : PBPRA3480 (PBPRA3480) Accession : YP_131553.1 Strain : Genome accession: NC_006370 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3932153 - 3933637 bp Length : 1485 bp Strand : - Note : - DNA sequence : ATGGAAGACACGGCAATATCGTTGTTCCGTCTGCCATTTTCATTTGCGAAGCGTCATCGTGTTGTGCTTGAAGCCAGTGA AAATGGTTGGACGTTATCCTATAGCGGACAACTTTCTGCGGCCGTCTTAGTGGAAGTTCGGCGTGTCGCGGGAAGCGGTT TTGTGCCAATAGAATTGACCAGCAAAGAGTTTGAATTAAAGCTCACAGAGGCGTATCAGCGTGGCTCATCTGAAGCGCGT CAGCTAATGGAAGATTTAGGCGCCGATGATGATTTCTTCTCGCTTGCCGAAGATCTGCCTGAAACCGAAGACTTACTGGA ATCGGAAGATGATGCACCAATCATAAAATTGATTAATGCCATGTTAGCAGAAGCCATCAAAGAGGCAGCGTCAGATATCC ATATTGAGACCTTTGAGAAAGCCTTATCAATCCGTTTTCGTGTTGATGGTGTATTACGTGAAGTATTGCAGCCTAGCCGT AAATTGGCACCGTTGCTGGTTTCGCGTATTAAGGTCATGGCACGTCTTGATATTGCAGAAAAACGTGTTCCTCAAGATGG GCGTATTTCGCTGCGAATCGGGGGTCGTGCAGTAGATGTCCGCGTATCGACGATGCCGTCATCACATGGCGAGCGGGTTG TATTGCGTTTGCTTGATAAAAACGCCACCCGACTTGATTTGCATAGCTTGGGTATGACTGCTGAGAACCATAAAACTTTC CGTCATATTATCCAGCGTCCACACGGCATTATTCTTGTTACCGGTCCGACAGGTTCGGGTAAATCCACCACCTTGTACGC GGGTTTACAAGAGCTGAATAGCCAAGAAAGTAATATTCTTACCGTTGAAGATCCGATTGAATTTGATATTGAAGGGATAG GGCAAACACAGGTTAATACCAAAGTTGATATGACCTTTGCTCGTGGTTTGAGAGCTATTTTACGTCAGGATCCTGATGTC GTTATGATTGGTGAAATACGAGATTTAGAAACGGCATCGATTGCCGTTCAAGCGTCTCTAACCGGTCATATGGTGTTATC AACTTTACACACTAATACCGCGATTGGTGCGGTTACTCGATTACGCGATATGGGTATCGAGCCTTTCTTGGTTTCATCGT CATTGTTAGGGGTATTGGCTCAACGTTTAGTTCGTACTTTATGTGTTCAGTGCCGAGAACCCTATGAGGCAAATATCGAG CAGAAGAAACTCTTTAATATCAGTACCGATGAGCCATTAACGCTCTATCATGCTGTAGGTTGTGAGCACTGTAATAACAA AGGCTATCGTGGTCGTACGGGTATCCACGAGTTGTTATTGATTGATGATAATGTTCAAGAGCTTATCCACTCTGAAGCGG GTGAGCAGTCGATTGAGAAAGTTATTCGAGAGTATACGCCAAGTATTCGAGATGACGGTCTAGCCAAAGTTAAACGCGGT ATCACGACACTTGAAGAAGTGATGCGTGTAACCAAGGAGGGCTAA Protein sequence : MEDTAISLFRLPFSFAKRHRVVLEASENGWTLSYSGQLSAAVLVEVRRVAGSGFVPIELTSKEFELKLTEAYQRGSSEAR QLMEDLGADDDFFSLAEDLPETEDLLESEDDAPIIKLINAMLAEAIKEAASDIHIETFEKALSIRFRVDGVLREVLQPSR KLAPLLVSRIKVMARLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVLRLLDKNATRLDLHSLGMTAENHKTF RHIIQRPHGIILVTGPTGSGKSTTLYAGLQELNSQESNILTVEDPIEFDIEGIGQTQVNTKVDMTFARGLRAILRQDPDV VMIGEIRDLETASIAVQASLTGHMVLSTLHTNTAIGAVTRLRDMGIEPFLVSSSLLGVLAQRLVRTLCVQCREPYEANIE QKKLFNISTDEPLTLYHAVGCEHCNNKGYRGRTGIHELLLIDDNVQELIHSEAGEQSIEKVIREYTPSIRDDGLAKVKRG ITTLEEVMRVTKEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-159 | 66 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-159 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PBPRA3480 | YP_131553.1 | general secretion pathway protein E | VFG2048 | Protein | 1e-157 | 65 |
| PBPRA3480 | YP_131553.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-147 | 65 |
| PBPRA3480 | YP_131553.1 | general secretion pathway protein E | VFG1876 | Protein | 2e-133 | 56 |
| PBPRA3480 | YP_131553.1 | general secretion pathway protein E | VFG2426 | Protein | 8e-79 | 47 |
| PBPRA3480 | YP_131553.1 | general secretion pathway protein E | VFG0112 | Protein | 7e-88 | 46 |
| PBPRA3480 | YP_131553.1 | general secretion pathway protein E | VFG0233 | Protein | 2e-86 | 46 |
